Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04377 ATGGCTTCCAACAACACCAATCACCACCGTTCAATCACTGAAATCAACGGCTCACATCCAATCCCCAAAAAACCTAAACTCTCTTCTTCATCTTTCATAACCGCTTCCGAAATTCAATCGGAATTCTCTCACCATGACACCACCGTCGCACGCATCAACAACGGCAGCTTCGGTTCATGTCCTTCCTCCATCATCTCCGCTCAACAACAATGGCAACTCAAATACCTTCGTCAACCAGATCAATTCTACTTCAACTACCTCAAACCAGCTATCAACAATTCTCGTTCAATTATCAAAGATTTAGTCAACGCTCAACACCTCGACGAAATTTCAATCGTCGATAACGCAACCACTGCTGCTGCTATTGTTCTTCAACACACCGCTTGGTGTTTCCGTGAAGGTAAATTCAATAAAGGTGATGTAGTTATTATGCTTCATTATGCTTATGGTGCTGTTAAGAAATCCATGGAAGCTTATGTTACTCGTGCTGGTGGAAAAGTAATTGAAGTTCCTCTTCCTTTTCCGGTGAGTTCTAATGATGAAATTGTGACTGAATTTAGAAAAGCTTTGGAGAAAGGAAAAAtggatggaaaaaaaattaggttagcTGTGATTGATCATGTTACTTCTATGCCTTGTGTCGTTATTCCTGTTAAGGAATTGATTCAAATTTGTAGAGAGGAAGGTGTTGAACAGGTTTTTGTGGATGCTGCTCATTCAATTGGATGTGTTGATGTTGATATGCAAGAGATTGGTGCTGATTATTATACTAGTAATTTGCATAAGTGGTTTTTTTGTCCGCCTTCGATTGCGTTTTTGTATACTAAGAAGAACCCTAAAAGTGGTGGTAGTGATTTGCATCATCCTGTGGTGTCTCATGAGTATGGAAATGGGTTGGCTGTGGAAAGTGCTTGGATTGGGACAAGGGATTATAGTGCTCAATTGGTGGTTCCAAATGCTTTGGAGTTTGTCAATAGGTTTGAAGGTGGAATTGAAGGGATTAAGAAGAGGAATCATGAAGTTGTTGTTGAGATGGGAGAGATGTTGGTTAAGGCTTGGGGAACTCATCTTGGGAGTCCTGCACATATGTGTGCTAGTATGGTTATGGTTGGTTTGCCTACTTGTTTGGGGATTCATAGCGAGTCTGGTGCACTCAAGTTGAGGACACATTTGAGGGATGTTTTTGGGGTTGAAGTTCCTATATACTATAGACCACCTAGAGATGGAGAAGTTGAGCCTGTAACAGGGTATGCTCGGATTTCTCATCAGGTTTACAATAAAGTTGAGGACTATTACAAGTTTAGGGATGCTGTTAACCAACTTGTTGATAATGGGTTTGCTTGTACTCTTCTTTCCGGTTGA 1362 0.4023 MASNNTNHHRSITEINGSHPIPKKPKLSSSSFITASEIQSEFSHHDTTVARINNGSFGSCPSSIISAQQQWQLKYLRQPDQFYFNYLKPAINNSRSIIKDLVNAQHLDEISIVDNATTAAAIVLQHTAWCFREGKFNKGDVVIMLHYAYGAVKKSMEAYVTRAGGKVIEVPLPFPVSSNDEIVTEFRKALEKGKMDGKKIRLAVIDHVTSMPCVVIPVKELIQICREEGVEQVFVDAAHSIGCVDVDMQEIGADYYTSNLHKWFFCPPSIAFLYTKKNPKSGGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPNALEFVNRFEGGIEGIKKRNHEVVVEMGEMLVKAWGTHLGSPAHMCASMVMVGLPTCLGIHSESGALKLRTHLRDVFGVEVPIYYRPPRDGEVEPVTGYARISHQVYNKVEDYYKFRDAVNQLVDNGFACTLLSG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04377 453 Gene3D - 80 326 IPR015421 GO:0003824
Tsu07g04377 453 Pfam Aminotransferase class-V 88 370 IPR000192 -
Tsu07g04377 453 PANTHER L-CYSTEINE DESULFHYDRASE 18 452 - -
Tsu07g04377 453 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 18 452 - -
Tsu07g04377 453 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g04377 453 SUPERFAMILY PLP-dependent transferases 45 442 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04377 Tsu-Chr7 49037288 49041720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04377 K22207 - gmx:100786129 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04377 07 49037288 49041720 Tsu07g04377 07 49037288 49041720 ECH
Tsu07g04377 07 49037288 49041720 Tsu01g03602 01 43873699 43875060 PCT