Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03602 ATGGCCTCCCAtgatcaaaatcacaaaaacgGCGACCTTTCAAAGAAACCAAAGCTCTGTATCTCTCCGATCACTGACGCTGAGATTCAATCAGAATTCTCCCATCACGACCCCAACATAGCACGCCTCAACAACGGAGCCTTCGGTTGCTGTCCATCCTCTGTCCTCGCAGCTCAGCGTCAATGGCAGCTCAAATTCCTTCGTCAGCCCGATCACTACTACTTCAACTACCTAAAAAGCGGAATCCTCCATTCCCGAACCATCATCAAAGAACTTGTCAACGCCCAGCATCTCGATGAAATCTCCATTGTGGATAACGCCTCTACTGCCACCGCAATCGTTCTTCAGCAAGCAACCTGGGCTTTCCATGAAGGAAAGTTCAATAAAGGAGATGCTGTTGTTATGCTTCACTATGCTTACGGCTCTGTCAAGAAAGCTATCGAAGCATATGTCACACGTGCTGGTGGTAGAGTCATCGAGGTTCCACTTGCTTTTCCTGTTACCTCCGAAGACGACATTGTAAGAGAGTTTCGTCACGCGTTGGAAAAAGCAAAGTGTGAAGGTAgtagtaatagtaataataaagttaGATTGGCAGTTATCGATCATGTGACTTCTATGCCGAGCGTGGTGATTCCGGTGAAAGAGTTAGTTAAGATTTGTAGAGAGGAAGGGGTTGAGCAAGTTTTCGTTGATGCAGCTCATGCAATTGGCTGCACACCGAACGTTGATATGCAAGAGATTGGAGCTGATTTTTACGCAAGCAATTTGCATAAGTGGTTTTTTTGTCCACCTTCGGTCGCATTTATCTATGCGCGTAAATCAGTTAATTCAGTTGATTTGCATCACCCTGTCGTGTCACACGAGTACGGGAATGGATTAGCTATTGAAAGTTCATGGATTGGAAATAGAGATTATAGTGCTCAGTTAGTTGTTCCTGCTGTAATGGAATTTGTGAATAGGTTTGAAGGTGGAAttgaaggaattaaaaaaaggaACCATGATTGTGTTGTTGAGATGGGTGAGATGTTGGTGAAAGCTTGGGGGACACATCTTGGAACACCTCATCATATGAGTGCAAGTATGGTTATGGTTGGTTTGCCTCCTTCTTTGAGGATTATGAATGATTGTGATGCTATTAATCTTAGGACACATTTAAGGGAGTTTTTTGGGGTTGAAgtacctatttattttatagatgGAGGGGAAGTTGGATGTGTAAGTGGATATGCTAGAATATCTCATCAAGTTTATAATAAAGTTGATGATTATTACAAGTTTAGGGATGCAATTAATAAACTTGTAAGTGATGGATTCACTTGTGCTCTTCTTTCCACTTCAACTAATGGTAGTATGATTTAG 1362 0.4053 MASHDQNHKNGDLSKKPKLCISPITDAEIQSEFSHHDPNIARLNNGAFGCCPSSVLAAQRQWQLKFLRQPDHYYFNYLKSGILHSRTIIKELVNAQHLDEISIVDNASTATAIVLQQATWAFHEGKFNKGDAVVMLHYAYGSVKKAIEAYVTRAGGRVIEVPLAFPVTSEDDIVREFRHALEKAKCEGSSNSNNKVRLAVIDHVTSMPSVVIPVKELVKICREEGVEQVFVDAAHAIGCTPNVDMQEIGADFYASNLHKWFFCPPSVAFIYARKSVNSVDLHHPVVSHEYGNGLAIESSWIGNRDYSAQLVVPAVMEFVNRFEGGIEGIKKRNHDCVVEMGEMLVKAWGTHLGTPHHMSASMVMVGLPPSLRIMNDCDAINLRTHLREFFGVEVPIYFIDGGEVGCVSGYARISHQVYNKVDDYYKFRDAINKLVSDGFTCALLSTSTNGSMI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03602 453 PANTHER L-CYSTEINE DESULFHYDRASE 12 445 - -
Tsu01g03602 453 Gene3D - 68 318 IPR015421 GO:0003824
Tsu01g03602 453 SUPERFAMILY PLP-dependent transferases 33 435 IPR015424 -
Tsu01g03602 453 Pfam Aminotransferase class-V 79 276 IPR000192 -
Tsu01g03602 453 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 12 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03602 Tsu-Chr1 43873699 43875060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03602 K22207 - gmx:100796732 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03602 01 43873699 43875060 Tsu01g03602 01 43873699 43875060 ECH
Tsu07g04377 07 49037288 49041720 Tsu01g03602 01 43873699 43875060 PCT