Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04376 ATGGGGCAAAAGCATTTTGCTGTGGTGTTCTGTTTGTGGGCTTTAACATGTTCCCTGCTTCCTTTGTTCTCCTTTGGAATGATGAGAGTTGGTTTGCAGAAGAGACCTCTAGATCTTCATAGTATTAATGCTTTTAAAAAGGCAAGAGAACACCAACTAAGATCAGGAAGACCAATGATGGGTGGCAATTCCAATGATGAACCTATAGTACCTTTGAAGGATTATATGAACGCTCAATATTTTGGTGAGATTGCAATTGGCACGCCTCCACAAACCTTTACTGTCATATTTGATACCGGTAGTTCCAATCTTTGGGTTCCATCATCCAAGTGTTACTTTTCTCTTGCCTGTTATACCCATAATTGGTACAAGGCAAAGAAATCCCATACGTATAACAAAAACGGAACGTCTTGTAAAATAAGCTATGGAACCGGATCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTAGGCAGTTCCATTGTCAAGAATCAGGATTTCATTGAGGCTACCCGAGAAGGAAGTCTTGCTTTTCTCGCAGGAAAGTTTGATGGAATATTTGGACTTGGATTTCAAGAGATCTCAGTTGCAAGAGCTTTGCCAGTATGGTACAATATGGTGGAACAACATCTTGTCGGTGAGAAGGTCTTCTCCTTTTGGCTCAATGGGAATCCTAATGCGAAAAAGGGTGGCGAATTAGTTTTTGGTGGTGTTGACCCTAAGCATTTCAAAGGAAAACACACTTATGTTCCGGTTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTTCATTGGAGGCGCGTCAACAGGTGTTTGTGAAGGTGGTTGTGCTGCTATCGTGGACTCAGGAACATCTTTGCTTGCTGGTCCAACTGCTGTTGTAACTGAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAAGAAGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCCTTGTATCAGGGGTAAAACCTGGTGACGTATGTTCACAAGTAGGTTTATGTTCCATGCGCCGGGATCAATCGAAGAGTGCTGTGATTGAGATGGTGACTGAAAAAGAACAGAGTGAGGTTTCAGCTAGAGATACTCCTTTGTGTTCTTCCTGTCAGATGCTTGTTCTTTGGATTCAGAATCAACTAAAACAAAAGGCGACCAAGGAAAGAGTATTCAACTATGTGAATCAACTATGTGAGAGTATTCCAAGTCCATCCGGAGAATCAGTGATAAGCTGTAACGATATTACTAAGATGCCAAACATTTCATTCACTATCGGAGACAAACCCTTCGTCCTCACACCAGAACAGTATATTCTAAGAACCGGAGAAGGCATCACAGAGGTCTGCCTTAGTGGGTTTATTGCTTTTGATATTCCTCCTCCAAAGGGTCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGCATATCACACTGTTTTCGACTACGAAAACCTCCAAGTTGGTTTTGCTGAAGCTGCCTAG 1512 0.4147 MGQKHFAVVFCLWALTCSLLPLFSFGMMRVGLQKRPLDLHSINAFKKAREHQLRSGRPMMGGNSNDEPIVPLKDYMNAQYFGEIAIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSHTYNKNGTSCKISYGTGSISGFFSQDNVKVGSSIVKNQDFIEATREGSLAFLAGKFDGIFGLGFQEISVARALPVWYNMVEQHLVGEKVFSFWLNGNPNAKKGGELVFGGVDPKHFKGKHTYVPVTEKGYWQIEMGDFFIGGASTGVCEGGCAAIVDSGTSLLAGPTAVVTEINHAIGAEGVLSVECKEVVSQYGELIWDLLVSGVKPGDVCSQVGLCSMRRDQSKSAVIEMVTEKEQSEVSARDTPLCSSCQMLVLWIQNQLKQKATKERVFNYVNQLCESIPSPSGESVISCNDITKMPNISFTIGDKPFVLTPEQYILRTGEGITEVCLSGFIAFDIPPPKGPLWILGDVFMRAYHTVFDYENLQVGFAEAA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04376 503 Pfam Eukaryotic aspartyl protease 79 502 IPR033121 -
Tsu07g04376 503 Gene3D Acid Proteases 239 503 IPR021109 -
Tsu07g04376 503 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 3 503 - -
Tsu07g04376 503 ProSiteProfiles Peptidase family A1 domain profile. 80 500 IPR033121 -
Tsu07g04376 503 ProSiteProfiles Saposin B type domain profile. 310 350 IPR008139 -
Tsu07g04376 503 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 3 503 IPR001461 GO:0004190|GO:0006508
Tsu07g04376 503 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 282 293 IPR001969 GO:0004190|GO:0006508
Tsu07g04376 503 SUPERFAMILY Acid proteases 15 502 IPR021109 -
Tsu07g04376 503 Pfam Saposin-like type B, region 1 375 412 IPR007856 GO:0006629
Tsu07g04376 503 SUPERFAMILY Saposin 311 412 IPR011001 -
Tsu07g04376 503 PRINTS Pepsin (A1) aspartic protease family signature 86 106 IPR001461 GO:0004190|GO:0006508
Tsu07g04376 503 PRINTS Pepsin (A1) aspartic protease family signature 282 293 IPR001461 GO:0004190|GO:0006508
Tsu07g04376 503 PRINTS Pepsin (A1) aspartic protease family signature 232 245 IPR001461 GO:0004190|GO:0006508
Tsu07g04376 503 PRINTS Pepsin (A1) aspartic protease family signature 476 491 IPR001461 GO:0004190|GO:0006508
Tsu07g04376 503 Gene3D - 310 412 - -
Tsu07g04376 503 ProSiteProfiles Saposin B type domain profile. 373 414 IPR008139 -
Tsu07g04376 503 SMART sapb_4 274 346 IPR008139 -
Tsu07g04376 503 Pfam Saposin-like type B, region 2 314 346 IPR008138 -
Tsu07g04376 503 CDD phytepsin 70 501 IPR033869 GO:0004190
Tsu07g04376 503 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 95 106 IPR001969 GO:0004190|GO:0006508
Tsu07g04376 503 Gene3D Acid Proteases 28 238 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04376 Tsu-Chr7 49028930 49033404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04376 K08245 - gmx:548009 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04376 07 49028930 49033404 Tsu07g04376 07 49028930 49033404 ECH
Tsu07g04376 07 49028930 49033404 Tsu01g03604 01 43881138 43885892 PCT