Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04367 ATGAATTTGATAGCAagatatgtttttgtttttgttgatgtaGTTTTGTCAGCATTGGACAACATGGGTTTTGTTGCAAACATGGTTAGCTTAGTTCTATACTTTTATGGAGTGATGCATTTTGATCTATCAAGTTCTGCAAATACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTTTCACTTGTTGGTGGTTTCATCTCAGATACTTATTTGAATAGATTCACCACTTGCTTAATTTTTGGATCACTAGAAGTTCTTGCTTTGGCAATGGTTACTTTTCAAGCTGCTTCAGATCATTTACATCCAAATGCATGTGGGAAATCAAGTTGTATGAAAGGTGGAATAGGATTCATGTTTTATACATCATTGAGTTTATTGGCATTAGGTATTGGTGGAGTAAGAGGATCTATGACTGCATTTGGTGCTgatcaatttgaagaaaaagatcCAAATGAAGCAAAAGCTCTTGCTAGTTTTTTTAATTGGCTTTTACTTAGTTCAACTCTTGGAGCAATTACTGGTGTTACTGGTGTTATTTGGGTTAGTACACAAAGAGCTTGGCATTGGGGATTTTTCATAATTACTATAGCTTCTTCTATTGGTTTTATTACTCTTGCTCTTGGAAAGCCTTTCTATAGAATCAAAACTCCAGGAGATAGTCCCACAATCAGAATTGCTCAGGTTATTGTTGTGGCATTTAAAAACCGAAAGTTGTCAGTGGCAGGATCACACGAAGAACTATATGAAATGAGTGACAAAGATGCAACAGTAGAGAAAATTGTTCACACAAAACAAATGAGGTTTCTTGATAAAGCAGCAATTCTTCAAGAAAACATGAAACCACAACCATGGAAAGTGTGCACAGTTACACAAGTCGAAGAAGTGAAAATCCTAACAAGAATGTTACCAATAGTAGCCAGCACAATTATCATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTACAACAAGGAAACACAATGAACCTTAAACTTGGTTCATTTACAGTTCCAGCATCATCAATTCCTGTTATCcctcttattttcataagcatATTGGTTCCAATATATGAACTTTTCTTTGTTCCATTTGCAAGAAAAATCACTAATCACCCTTCAGGAATCACACAGCTTCAAAGGGTAGGTGTTGGATTAGTACTTTCAGTTATATCAATGACAGTAGCTGGAATTGTTGAAGTGAAAAGAAGAGACCAAGGTAGAAAAGACCCAAATAACCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGCATATTTGGTATTGCTGATATGTTCACACTTGTGGGActattggaatttttttatagagaatCACCTTCAAATATGAAATCATTATCAACATCTTTCACATGGTTATCTATGTCAATTGGTTACTTCTTAAGTACTGTTTTTGTCAACTTGATTAATGTTGTTACAAAAAGGATTACTCCTAGTAAAAAAGGTTGGTTACAAGGGTTTGATTTGAATCAAAGTAATTTGAACCTATTTTATTGGTTCCTAGCTATACTAAGTTgtcttaattttttcaactatcTTTATTGGGCCTCAAGATATAAGTACAAATCTGAAGAACAAGATTCAACAAGCCCAATAGGTTTGAAGAGTTTAAATGACATGCCTCATAAAATGATTGGTGGGACAAAACAAAATTGGGAAGGTAGCAACATTGGTGGAAACATCCAAGATTGA 1716 0.3287 MNLIARYVFVFVDVVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLIFGSLEVLALAMVTFQAASDHLHPNACGKSSCMKGGIGFMFYTSLSLLALGIGGVRGSMTAFGADQFEEKDPNEAKALASFFNWLLLSSTLGAITGVTGVIWVSTQRAWHWGFFIITIASSIGFITLALGKPFYRIKTPGDSPTIRIAQVIVVAFKNRKLSVAGSHEELYEMSDKDATVEKIVHTKQMRFLDKAAILQENMKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNTMNLKLGSFTVPASSIPVIPLIFISILVPIYELFFVPFARKITNHPSGITQLQRVGVGLVLSVISMTVAGIVEVKRRDQGRKDPNNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSNMKSLSTSFTWLSMSIGYFLSTVFVNLINVVTKRITPSKKGWLQGFDLNQSNLNLFYWFLAILSCLNFFNYLYWASRYKYKSEEQDSTSPIGLKSLNDMPHKMIGGTKQNWEGSNIGGNIQD 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04367 571 Pfam POT family 75 491 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu07g04367 571 SUPERFAMILY MFS general substrate transporter 10 533 IPR036259 -
Tsu07g04367 571 Gene3D MFS general substrate transporter like domains 7 536 IPR036259 -
Tsu07g04367 571 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 541 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu07g04367 571 PANTHER PEPTIDE/NITRATE TRANSPORTER 13 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04367 Tsu-Chr7 48942530 48946683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04367 16 541 Organic Solute Cotransporters AT1G59740 43.017 9.31e-141 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04367 K14638 - aprc:113861407 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04367 07 48942530 48946683 Tsu07g04367 07 48942530 48946683 ECH
Tsu07g04367 07 48942530 48946683 Tsu01g03628 01 44107007 44111531 PCT