Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03628 ATGGGAGATAAAGAAGTGAAAGAAGAACACAAACCAATTGTTGAATGGAAGAAACAAAAGGGTGGATTTAGAGCTTCCATGTTCATCTTTGTTTTGTCAGCATTGGATAACATGGGTTTTGTGACAAACATGGTGAGCTTAGTTCTATACTTTATTGGTGTGATGCACTTTGATCTTTCAAGCTCTGCAAATACTCTGACAAATTTCATGGGCTCAACTTTCTTGCTCTCCCTTGTTGGTGCTTTCATCTCAGATACTTACCTCAACAGATTAACCACATGTTTGCTTTTTGGATCACTAGAAGTTATTGCTTTGGTAATGATCACAATTCAAGCTGCATTAGACAAACTACACCCTGAAGCATGTGGTGAATCAAGCTGTGTAAAAGGAGGTATAGCAGTGATGTTTTACACATCATTGTGTTTATATGCTTTGGGTATGGGTGGAGTAAGAGGTTCAATGACAGCATTTGGTGCTGATCAATTTGATGAAAAGGAACCAAATGAAGCAAAAGCACTTGCAAGTTTTTTCAATTGGCTTTTACTTAGTTCAACTTTAGGTTCAGTTATTGGTGTTACTGGTGTTGTTTGGGTTAGCACACAAAAAGCTTGGCATTGGGGATTTTTCATAATCACTGTTTGTTCTTCAATTGGTTTTGTCACACTTGCTCTTGGTAAATCATTCTACCGTATCAGAGTTCCTGGTGAAAGCCCTATTTTAAGGATTGCTCAGGTTATTGTTGTGGCTTTTAAGAACAGAAAACTACCACTGCCAGAGACTAATGAACAACTTTATGAAGTGTATAAAGATGCTACTACTTTAGAGAAGATTGCACATACTAATCAAATGAGGTTTCTTGATAAAGCAGCAATTCTTCAAGAAAACACTGAACCTCAAAAACCATGGAAGGTTTGCACAGTTACACAAGTTGAAGAAGTAAAAATCCTAACAAGAATGTTACCTATATTAGCAAGTACAATTGTAATGAACACATGTTTAGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAACACAATGAACCTTAAACTAGGTTCCTTCACAGTACCTGCATCATCCATTCCTGTTATCCCTCTTATTTTCTTATGCACACTGATACCAATTTATGAACTTTTCTTTGTACCATTTGCAAGAAAAATCACTCATCACCCTTCAGGTGTTACACAGCTTCAAAGGGTTGGTGTAGGACTAGTACTCTCTTCAATTTCAATGACAATAGCTGGAATCATTGAAGTTAAAAGAAGAAACCAAGGGATAAAAGACCCTTCAAAACCAATAAGCCTATTTTGGTTATCTTTTCAATATGCTATATTTGGTATTGCAGACATGTTCACACTTGTTGGACTATTAGAATTCTTCTACAGAGAAGCACCTTCAACCATGAAATCACTTTCAACTTCATTCACATTTTTATCCATGTCACTTGGTTACTTCTTAAGtacaatttttgttaatgtTATTAATGCTGTTACTAAAAGGATTACACCAAGTAAACAAGGTTGGTTACATGGTTTTGATTTAAACCAAAACAATCTTAACTTATTCTATTGGTTCTTAGCTATCTTGAGCTGTCTTAATTTCTTTAACTTTGTATATTGGGCCTCTTGGTACAAGTACAAATCAGAAGATAGTAACAGTTCAATGATAATCACAAAGGAATTAGGTGAAACACCTCTCTTAATGGTTGGTGAAAGAaaacatgatgatgatgatgataaagaagaagatgaagacaaGAAATATCTTAAAGCTAAGGCCAAAGAAAGTAGCCAAACTAGTGAAGCCAATACTGAGGGACCCTCTTCTTCTGATGAAACAGATGATggacaaaagaaagaaagaaacagtAGAGAATGGAAGCATagataa 1890 0.3434 MGDKEVKEEHKPIVEWKKQKGGFRASMFIFVLSALDNMGFVTNMVSLVLYFIGVMHFDLSSSANTLTNFMGSTFLLSLVGAFISDTYLNRLTTCLLFGSLEVIALVMITIQAALDKLHPEACGESSCVKGGIAVMFYTSLCLYALGMGGVRGSMTAFGADQFDEKEPNEAKALASFFNWLLLSSTLGSVIGVTGVVWVSTQKAWHWGFFIITVCSSIGFVTLALGKSFYRIRVPGESPILRIAQVIVVAFKNRKLPLPETNEQLYEVYKDATTLEKIAHTNQMRFLDKAAILQENTEPQKPWKVCTVTQVEEVKILTRMLPILASTIVMNTCLAQLQTFSVQQGNTMNLKLGSFTVPASSIPVIPLIFLCTLIPIYELFFVPFARKITHHPSGVTQLQRVGVGLVLSSISMTIAGIIEVKRRNQGIKDPSKPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSTMKSLSTSFTFLSMSLGYFLSTIFVNVINAVTKRITPSKQGWLHGFDLNQNNLNLFYWFLAILSCLNFFNFVYWASWYKYKSEDSNSSMIITKELGETPLLMVGERKHDDDDDKEEDEDKKYLKAKAKESSQTSEANTEGPSSSDETDDGQKKERNSREWKHR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03628 629 Gene3D MFS general substrate transporter like domains 2 553 IPR036259 -
Tsu01g03628 629 MobiDBLite consensus disorder prediction 568 629 - -
Tsu01g03628 629 MobiDBLite consensus disorder prediction 595 610 - -
Tsu01g03628 629 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g03628 629 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 558 - -
Tsu01g03628 629 Pfam POT family 93 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g03628 629 MobiDBLite consensus disorder prediction 568 594 - -
Tsu01g03628 629 SUPERFAMILY MFS general substrate transporter 20 225 IPR036259 -
Tsu01g03628 629 SUPERFAMILY MFS general substrate transporter 135 549 IPR036259 -
Tsu01g03628 629 MobiDBLite consensus disorder prediction 611 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03628 Tsu-Chr1 44107007 44111531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03628 5 560 Organic Solute Cotransporters AT1G59740 41.084 3.32e-151 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03628 K14638 - gmx:100812867 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03628 01 44107007 44111531 Tsu01g03628 01 44107007 44111531 ECH
Tsu07g04367 07 48942530 48946683 Tsu01g03628 01 44107007 44111531 PCT