Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04283 ATGGAAACTCCACCATTAGACGACAAAGCAAAAAGAATGAGAGATCTTCTCTCCAGTTTCTACTCTCCACACCCTTCAATGTCCCCTGGCTCCCCTATGTCCTCAAAATACACCTCTTCCGATGACATCAACTCTTCGTCCTTCCAAAGTGATCACTACATGAATGCTATGGTACATGAATTTAATTTGGAAGAGTTGCTCCATAAGCACGTTGATATGGTTACTGAAATAAAGAATCTCGATACTGATTTGCAAATGCTTGTCTACGAGAATTACAATAAATTCATTTGCGCTACAGATTCTATAAAGAGGATGAAAAGCAATATTATAGGGATGGAGGGGGAAATGGAACAACTTCTTGATAAGATAATGTTTGTCCAGTCAAGGAGTGACAATGTTAACACCTCTTTGTTTGAAAATAGGGAGCATATAGAGAAGTTGAATAAGAAATGTAATCTTCTTCGTAAAATTCAgTTCATATATGACTTACCCGATAGATTAGGCAAGTGCATCAAAGTTGAGGCATATGCAGATGCAGTCAAGATGTACACTGGTTCAATGCCCATTTTTAAGACATATGGAGACTCATCATTCCAAGATTGCAAGCAAGCATCTGATGAAGCAATATCTATCATAGTAAAAAATTTACAGGAAAAACTACTTTCAGATTCTGAATCAACTCAAGTGAGGGCTGAGGCTGCAATTCTCCTTAAGAAGTTGGATATTCCgGTGGACAATTTGAAGGCAAATTTACTAGAGAAATTGGAACATTTTCTTATAGACATTCAGTTAATCCCTGAAGTAGTAGAGATTGTTTCGCCTTCTTCGCACGAGGTAGCCTTCCATGAGTTTGTGGAGGCCGTTCGTGCATTTCAGAACATATTTCCCGATTCAGAAATGCAGTTAGTTAAACTTGGCCTAGATTTAGTAAACAAGAACTTTCTAATTGTTGAGGAATACATAAAGACACGAATTTCTGCAGAAGATCTACTTGTCGTTCTTCGAGTTATCTGGAATGATGTGCTTCAAATGGATGAAGTGTTACAAGAATCTTCTCTCTCTAATCATTCTCTCGAGGCTGCCAAAGTTTCTATCAAGTCGTTCGTTAACATTGCATTTTCTTATCTAATGCAAGATATATCAGATTTCGTATTAAATGTGTTGAAACGAGACGAAGGTGATCATCACTCACTGAAAGATGCTTTAAATGCTAGCACAAAAACATTACTCCAAGGAAGCAAAAAGTTTTTGGTGGATGTCTGCAAAATTCTTGACGACAGCGTAGAGATTCTAAATAAATCAAGAGAGTTAATACTTGATTGGGTTCAAGAAGGGTTTCAAGACTTTTTTAGACAACTTTGTCTCCAATTTCAATTGTTTGCAGGAAGAAACGATTTTGCAGTTATTCAAAACCAGAGTTTGATAGAGGGATCTCAAGGTGACAAAGCTTTTCCTGGTCTTGTGTTGGTGTTGGCAAAGCTATCCGCTTTCATTGAACAGTCTGCCATTCCAAAAATCAACGAgGAACTAGCAGCTTCTTTTTCTTGTAGTAGTGTTAGAGGTTATGGACATGGACTATTTGTTCCAGAAGGGATCTCTCAAAAGTTTAGGACTGTCAGTGAAAGTTTCTTGCATAAGtatattaAAATGAGAACTCAACGGATATCACTTATTCTAAAGAAGAGGTTTAGCACGCCTAATTGGGTAAAACATAAGGAGCCGAGAGAAGTCCACATGTTTGTGGATTTGTTTCTACAAGAGCTCAGGGTTATAGGTAACGAAGTTATTGAGACTTTGCCTAAAGGCATGCAGAAACACCAAAGGGCTGATAGTACCTGTAGTAGTAATTTATCATTGTCAAGAAGCAACTCCATTCCAGATGAGATGTTGAGTAGGTCAAATACTCAAAAGGGAAGAAACCAACAATACTTTGAAACACATTTGGCCAAACTATTCAAgcaaaaagttgaaattttcaCAAAAGTGGAATATACACAGACATCAGTTCTTATGACCATGGTTAAATTATGTCTCAAGAGTTTACAAGAATTTGTTAGACTACAGACATTTAACCGGAGTGGATTCCAACAAATTCAATTGGATATTCAATTCTTGAGGACCCCATTAAAAGAAATAGTTGAAGATGAAGCTACAATAGAATTCTTACTTGATGAGgTGATTGTTGCCGCTGCAGAACGATGCCTAGACCCAATTACATTGGAGCTCCCAATTTTAGACAAACTTATACGAGCAAAGTTgacaaaaacttaa 2271 0.3668 METPPLDDKAKRMRDLLSSFYSPHPSMSPGSPMSSKYTSSDDINSSSFQSDHYMNAMVHEFNLEELLHKHVDMVTEIKNLDTDLQMLVYENYNKFICATDSIKRMKSNIIGMEGEMEQLLDKIMFVQSRSDNVNTSLFENREHIEKLNKKCNLLRKIQFIYDLPDRLGKCIKVEAYADAVKMYTGSMPIFKTYGDSSFQDCKQASDEAISIIVKNLQEKLLSDSESTQVRAEAAILLKKLDIPVDNLKANLLEKLEHFLIDIQLIPEVVEIVSPSSHEVAFHEFVEAVRAFQNIFPDSEMQLVKLGLDLVNKNFLIVEEYIKTRISAEDLLVVLRVIWNDVLQMDEVLQESSLSNHSLEAAKVSIKSFVNIAFSYLMQDISDFVLNVLKRDEGDHHSLKDALNASTKTLLQGSKKFLVDVCKILDDSVEILNKSRELILDWVQEGFQDFFRQLCLQFQLFAGRNDFAVIQNQSLIEGSQGDKAFPGLVLVLAKLSAFIEQSAIPKINEELAASFSCSSVRGYGHGLFVPEGISQKFRTVSESFLHKYIKMRTQRISLILKKRFSTPNWVKHKEPREVHMFVDLFLQELRVIGNEVIETLPKGMQKHQRADSTCSSNLSLSRSNSIPDEMLSRSNTQKGRNQQYFETHLAKLFKQKVEIFTKVEYTQTSVLMTMVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTPLKEIVEDEATIEFLLDEVIVAAAERCLDPITLELPILDKLIRAKLTKT 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04283 756 Pfam Vps51/Vps67 43 127 - -
Tsu07g04283 756 MobiDBLite consensus disorder prediction 20 43 - -
Tsu07g04283 756 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 3 725 - -
Tsu07g04283 756 PANTHER UNCHARACTERIZED 3 725 IPR014812 -
Tsu07g04283 756 MobiDBLite consensus disorder prediction 21 43 - -
Tsu07g04283 756 Coils Coil 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04283 Tsu-Chr7 48285105 48292265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04283 K20296 - gmx:100779149 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04283 07 48285105 48292265 Tsu01g02388 01 25663514 25668502 PCT