Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04273 ATGGCGGTCACCACTCACTCTCTCACCGCTACAGAAAAGAAACACTGGTGGCTCACTAACCGTAAGATTGTTGAGAAATACATAAAAGATGCACGAACCTTAATAGCAACGCAAGAACAAAACGAGATTGTTTCGGCTTTGAATCTTCTAGATGCAGCTTTAGCTATATCACCACGTTTGGATCAAGCACTTGAACTTAAAGCTAGATCGTTACTTTATCTACGAAGATTCAAAGATGTTGCTGATATGCTACAAGATTACATTCCTAGTTTGAGAATGTCGAATGAAGatccttcttctgtttcttctgATAGTTCTTCCAGAGAAGGAGTTAAGCTTCTTTCGTCTGATTCATTGATTCCAGATCAGAGTTTTAAGTGTTTCTCTGTTTCTGATCTCAAGAAGAAAGTTATGGCAGGTCTTTGTAAAACTTGTGATAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTGAAGCATGCTGCCACTTGGGATTAATGGAAGATGCAATGGTTCTTCTCCAAACCGGAAAACGAATTGCCAGTGCAGCATTCCGGCGAGAGAGTGTCTGTTGGTCCGACGACAGTTTTCCTCTATTGACCATCCCCATTGCTGGAGATGCCCTAAACCAACAACCCACCACACCGCCGCGAGCCCCTCTCAATGAAACAGAAAGTGTAACACACCTCCTCAGCCACATCAAGTTCCTTCTCCGCCGTCGAGCAGCAGCACTTGCTGCCCTCGACGCTGGTCTCTACTCAGAAGCCATCCGCCATTTCTCCAAAATAGTAGATGGCCGCCGTGCTGCCCCACAAGGTTTCCTCGCAGAATGCTACATGCACAGAGCTTCTGCACACCGTTCTGCCGGTCGAATCGCAGAGTCCATTGCCGATTGTAACCGTACCCTTTCGCTAGACCCAACCTGTATTCAAGCCCTTGAAACTAGAGCTTCACTCTTCGAAACAATTCGTTGCTTACCTGATTCACTACACGATTTAGAACATCTAAAGCTTCTCTACAACACAATTTTACGTGATCGGAAACTTCCAGGTCCAGCATGGAAACGCCACAATGTGAGATACAGAGAGATTCCAGGGAAACTCTGTGCCTTAACCACTAAGAttcaagaattaaaacaaaGGTTATCTTCCGGTGAAACAACTACTGTTGATTACTATGCATTGATTGGTGTTCGACGTGGATGTTCACGTTCTGAACTGGAGAGAGCTCATTTGTTGCTATGTCTTCGCCATAAGCCAGATAAATCTACAAATTTCATTGAACGGTGTGAGTTTGCGGATGAACGTGATATTGAGACCGTTAAAGAGAAAGCTAAGATGTGTTCGTTATTGCTGTATAGATTGATTCAAAAGGGCTACACTAGTGTGATGAGTAATGTTTTAGATGAGGAGGCTGCTgagaaacaaaagaagaagaatgttgcGGCAGCAGCACAAGCTCAAGCTCAGGCCGCGGCAATTCAAGTTCAAGcaattaagaaaacaaatgaagcTGAGTTGAAACATAATAAAACTGAAGATAAGAGTACTAATAATGTTTTTGCGGAAAATGATCAGTCTCTGATATCATCTTCTAATGTGAATCCGGCGGTGTTTCAAGGTGTATTTTGCCGTGATCTTGCGGTGGTAGGAAACTTGTTGACGCAGGTGGGATTTAATCGTCCGATTCCAGTGAAGTATGAAGCATTGAGCtgctaa 1716 0.4184 MAVTTHSLTATEKKHWWLTNRKIVEKYIKDARTLIATQEQNEIVSALNLLDAALAISPRLDQALELKARSLLYLRRFKDVADMLQDYIPSLRMSNEDPSSVSSDSSSREGVKLLSSDSLIPDQSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLTIPIAGDALNQQPTTPPRAPLNETESVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLSLDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLSSGETTTVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKSTNFIERCEFADERDIETVKEKAKMCSLLLYRLIQKGYTSVMSNVLDEEAAEKQKKKNVAAAAQAQAQAAAIQVQAIKKTNEAELKHNKTEDKSTNNVFAENDQSLISSSNVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04273 571 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 571 - -
Tsu07g04273 571 Gene3D DnaJ domain 375 521 IPR036869 -
Tsu07g04273 571 CDD DnaJ 390 424 IPR001623 -
Tsu07g04273 571 SUPERFAMILY TPR-like 241 336 IPR011990 GO:0005515
Tsu07g04273 571 SUPERFAMILY Chaperone J-domain 386 424 IPR036869 -
Tsu07g04273 571 PANTHER - 1 571 - -
Tsu07g04273 571 SMART tpr_5 275 308 IPR019734 GO:0005515
Tsu07g04273 571 Coils Coil 467 487 - -
Tsu07g04273 571 Gene3D Tetratricopeptide repeat domain 208 348 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04273 Tsu-Chr7 48195935 48199161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04273 - - gmx:100808420 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04273 07 48195935 48199161 Tsu01g03746 01 45204473 45207414 PCT