Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03746 atGGCCATCACTACTCCTTATCAAAATGTCACAGAAAAAAAACATTGGTGGCTCACAAATCGCATGATTGTTgagaaatatataaaagatgCAAGAACACTCATTGCGTCACAAGAACGCAACGAGATTGTTGCAGCTATTAGTCTTCTTGATGCAGCTTTAACTATATCTCCAAGTTCAGATCAAGCACTTGAATTAAAAGCTAGatctttactttatttaagaaaattcaaagatgtAGCTAATATGCTTCAAGATTATATTCCAAGTTTGAAAATGGCTAATGATGATTCAAGTTCTGTTTCTTCTGATGGTTCTTCTCAACAACTTTCAAGAGAAGGGGTTAAGTTACTTTCTTCATCGGATTCTTCTGTTTCAGATCAGAGTTTCATTAAATGTTTCTCTGTTTCTGATTTGAAAAAACGTGTCATGGCTGGTCTCTGTAAAAGTGCTGATAATCAAGGATATTGgagATACTTGGTTTTGGGGAAAGCATGTTGTCACTTAGGTCTAATGGAAGATGCAATGGTTCTTCTTCAAACCGGAAAACGTCTCGCCAGCGCTGCATTCCGCCGTGAAAGCGTGTGCTGGTCCGACGACAGTTTCTCTCTATGGAACACACCATTCTCCAGCGACGACGCCGTTTTAAAGCCACCTGCAACAACACCACCAAAAAGTCCTTTAACAGAATCAGAAACAGTAAACCAACTCTTAGCACACATAAAATTCCTCCTCCGTAGGCGCGCCGCTGCAATTGCCGCAATGGACGCCGGACTTCACTCAGAAGCTATTCGCCACTTCTCGAAAATCGTTGACAGTCGTCGCGGTGCTCCGCAAGGCTTCCTCGCTGAATGTTACATGCATAGAGCCACTGCGAATCGTTCTGCAGGTAGAATTGCTGATTCAATTGCTGATTGTAACAGAACATTATCACTTGATCCTACATGTATTCAAGCACTTGAATCTAGAGCTTCAATTCTAGAAACAATTCGTTGCTATCAAGATTGTCTTCATGATCTCGAACATTTGAAACTCCTATACAACACAATCCTCCGTGATCGGAAACTCGCCGGTCCGTTATGGAAGCGCCACAATGTACGTTATAATGAAATTCCAGGAAAACTCTGCACATTAACAGCTAAAATTCAACAGCTGAAACAAAAGGTTTCTTCCGGCGAAAATTCGCGGAATGTGGACTATTACGGTTTAATCGGATTACGACGCGGTTGCTGTCGATCAGAGTTGCAGAGGGCTCATCTTTTGCTTTGTTTGAAGCATAAACCAGAAAAGGCCACTTGTTTTATCGAACGGTGTGAACTCGCCGATGAACGTGATATTGATTCAGTTAAAGATAGAGCAAGAATGGCTTCTATGTTGTTGTATAGATTGCTTCAAAAAGGTTACACAAATGTTATGAATTCTATCGCTGAAGAAGAAAATGCTGAGAAACAGAAGAAGATTGTTTTACAGTTGCAACAAACTGAACAGAAACTtctaaattcaaattcaaatgcaaATTCAATTGCAAATGTTAATGCAAATGTTAATGTGAATGTGAATTCAGTTGTTGTTCAAGTGATGGCTCAAAAGAAAAGTAGAGATGTAATGGAGGATAAATTTGCAATGTCTTCACCTAGTATTGCAAATCCAACGGTGTTTCAAGGGGTGTTTTGCCGTGATCTAACGGTGGTGGGGAATTTGATTTCACAAAGGTTTAGTAGTAGGTCAATTCCGGTCAAATATGAGGCACTTAGTTGTtga 1761 0.3884 MAITTPYQNVTEKKHWWLTNRMIVEKYIKDARTLIASQERNEIVAAISLLDAALTISPSSDQALELKARSLLYLRKFKDVANMLQDYIPSLKMANDDSSSVSSDGSSQQLSREGVKLLSSSDSSVSDQSFIKCFSVSDLKKRVMAGLCKSADNQGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLWNTPFSSDDAVLKPPATTPPKSPLTESETVNQLLAHIKFLLRRRAAAIAAMDAGLHSEAIRHFSKIVDSRRGAPQGFLAECYMHRATANRSAGRIADSIADCNRTLSLDPTCIQALESRASILETIRCYQDCLHDLEHLKLLYNTILRDRKLAGPLWKRHNVRYNEIPGKLCTLTAKIQQLKQKVSSGENSRNVDYYGLIGLRRGCCRSELQRAHLLLCLKHKPEKATCFIERCELADERDIDSVKDRARMASMLLYRLLQKGYTNVMNSIAEEENAEKQKKIVLQLQQTEQKLLNSNSNANSIANVNANVNVNVNSVVVQVMAQKKSRDVMEDKFAMSSPSIANPTVFQGVFCRDLTVVGNLISQRFSSRSIPVKYEALSC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03746 586 PANTHER - 3 586 - -
Tsu01g03746 586 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 586 - -
Tsu01g03746 586 SUPERFAMILY TPR-like 249 344 IPR011990 GO:0005515
Tsu01g03746 586 CDD DnaJ 399 432 IPR001623 -
Tsu01g03746 586 Gene3D Tetratricopeptide repeat domain 211 357 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03746 Tsu-Chr1 45204473 45207414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03746 - - gmx:106797171 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03746 01 45204473 45207414 Tsu01g03746 01 45204473 45207414 ECH
Tsu07g04273 07 48195935 48199161 Tsu01g03746 01 45204473 45207414 PCT