Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04239 ATGCAAGGTTCacgaatgatgatgatgaagtctTCACTaatatttctttctattttaatcCACCTAACACTTTCACACTCATCAACCCAAAACCAAAATTTATCAGTCTACGAAGCCCTTCAACAATATGATTTCCCAGTTGGTATTCTTCCACAAGGTGCAACAAGCTATGAACTAAACAAAAACACTGGAAAATTCACTGTCTATTTTGATGGAACATGCATCTTTGGTATAAAATCCTATGATCTCAAGTACAAATCTACAATTAAAGGATTTATATCTAAAGGTAAACTTACTAAGTTGAAGGGTATTAGTGTCAAAGTTGAATTGTTATGGCTTAAAATTGTGGAGGTTACTCGTCATGGTGATGATCTTCAATTCTCTGTTGGTATTGCTTCTGCTAAATTTGgtgttgataattttttagagattccTCAGTGTGGTTGTGGATTTGATTGCAATAGTTTCAGTAATGATGCTAATTTATCTtctatttag 498 0.2912 MQGSRMMMMKSSLIFLSILIHLTLSHSSTQNQNLSVYEALQQYDFPVGILPQGATSYELNKNTGKFTVYFDGTCIFGIKSYDLKYKSTIKGFISKGKLTKLKGISVKVELLWLKIVEVTRHGDDLQFSVGIASAKFGVDNFLEIPQCGCGFDCNSFSNDANLSSI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04239 165 Gene3D - 21 146 IPR036758 -
Tsu07g04239 165 PANTHER DUF538 FAMILY PROTEIN 13 159 - -
Tsu07g04239 165 Pfam Protein of unknown function, DUF538 36 141 IPR007493 -
Tsu07g04239 165 PANTHER T31J12.3 PROTEIN-RELATED 13 159 IPR007493 -
Tsu07g04239 165 SUPERFAMILY At5g01610-like 9 153 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04239 Tsu-Chr7 47927107 47928520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04239 - - mtr:MTR_7g108775 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04239 07 47927107 47928520 Tsu01g03792 01 45655495 45656731 PCT