Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03792 ATGACTAGCCCCGtcatcttcctcctcctcctgaCGGTGGCGCTAACCGTCTCCGCTTCACCAACAGCCTACGAAGCCCTAAGAACTTACAACTTCCCCGTAGGAATTCTCCCAAAAGGAGTAATCAGTTACGAATTAGACGAATCAAGTGGCCATTTCCGCGCCGATCTAAACGGTTCGTGCAGTTTCTCCTTAGAAGGTTCGTATCAATTGAGTTACAAATCAACCATCACAGGTCGTATATCAGAAAACAAACTAACCGATCTCAGGGGTATAAGTGTCAAAGTGTTATTCTTCTGGGTGAATATTCTTGAGGTTGTTCGTAAACATGATGATCTTGATTTTTCTGTTGGTGTTGCAACTGCTTCTTTTCCGTTAGATAATTTCTTTGTTTCTCCACAGTGCGGTTGCGGTTTGGATTGTGATGAATTAAGAATAAGAAAACTTAAGTTGAATACAAAAAACAACCCTACTCTTTCCTCTGCTTAG 489 0.3988 MTSPVIFLLLLTVALTVSASPTAYEALRTYNFPVGILPKGVISYELDESSGHFRADLNGSCSFSLEGSYQLSYKSTITGRISENKLTDLRGISVKVLFFWVNILEVVRKHDDLDFSVGVATASFPLDNFFVSPQCGCGLDCDELRIRKLKLNTKNNPTLSSA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03792 162 Pfam Protein of unknown function, DUF538 23 129 IPR007493 -
Tsu01g03792 162 PANTHER T31J12.3 PROTEIN-RELATED 14 153 IPR007493 -
Tsu01g03792 162 PANTHER F22D16.19 PROTEIN 14 153 - -
Tsu01g03792 162 SUPERFAMILY At5g01610-like 6 141 IPR036758 -
Tsu01g03792 162 Gene3D - 10 136 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03792 Tsu-Chr1 45655495 45656731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03792 - - gmx:100808207 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04239 07 47927107 47928520 Tsu01g03792 01 45655495 45656731 PCT