Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04197 ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGAAGAAGAACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCAATTTCTGATGTCTCTAGTGATCTTACCATCCAAATAGGAGCATCAACCTTTTCACTTCATAAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGGAAGCTTCTATCAGAAGTAAAAGATTCAAAAGTTCCGCGCGTAAGTCTTCCAACTGTGCCAGGCGGCGTAGAGGCATTTGAACTAGCTGCGAAATTCTGTTATGGAATCAACATTGATTTCACTCTCTCAAATATTGCTATGCTACATTGCATATCTTATTTTCTTGAAATGACAGAAGAATTTTCAGAAAAGAATTTGGTGACAAGAGCGGAATCGTATTTAAAAGAAATAGTACTTCCAAACACATCAAGCATTATAAATGTTCTTCACCATTGTGAGAATCTTGTTCCTTTATCGGAAGAAATAAACCTTGTTAATCGGCTAATTAATGCAATTGCGAATAATGCATGCAAAGAGCAACTTACTTCTGGTTTGTTAAAACTTGATCACACTTTTCCTTCTAAAACAACATCAATGATGGAACCAGAAACACCGTCGGATTGGTGGGGAAACTCGTTAAATGTTCTTGGTCTTGATTTCTTCGAACGTGTTGTATCGGTTATGAAATCGAAGGGATTAAAACAAGAGTTGATAAGCAAAATTTTGGTAAACTATGCACATAATTCACTTCAAGGGACTACTAGTGTTAGTTCACTTGACATAGaattgcaaaagaaacaaaaggtaATTGTCGAAACTATAGTTCGGTTACTACCAACTCAATCGAGGAAAAGTCCAATTCCAATGGCGTTTCTATCATGTTTATTGAAAACTGCGATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATCTAGAGAGGCGTATCGGTCTACAACTCGATCAGGCAATCCTCGAAGACATACTTATTCCAACGAATTCGCCTTCAAATACACACAGCACAATGTATGATATAGATTCAATTTTGAGGatcttttctacttttctaaACTTGGATGATGTGGATGATGAAGACAGTGATTTCAGAGATGAAAGCCAAATGATGTATGAGTATGAATTCGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCGAAATTACTAGACAATTTTCTTGCTGAAGTAGCACTAGACTTGAACCTTTTGCCATCAAAATTCATAGCACTTGCGGAACTTCTTCCGGATCATGCTCGTGTTACAAGCGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCGAACATTAAGGACTCTGAGAGGTACCGCCTAAGCAAAACAATCGATTGTCAGAAGCTATCTCAAGAAGCATGCAGTCATGCAGCACAAAATGAAAGGCTACCGGTACAAATAGGTGTACAAGTTCTATACTACGAACAAATAAGGCTTCGTAACGCAATGAACGGAGGACACAATCAAATCTCGTTTGGTGGAATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCGCCTAGAGATAACTATGCATCAGTACGAAGAGAGAATCGAGAGCTGAAGCTTGAAGTTACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAACTTGTTAAGACACATCCTGCACACAAATTCTTCAAATCATTTGCCAAAAAACTAAGCAAATTAAATGCAATATTTCGTATTAACAGTACTCGTGGCAGTGGAACCGGAAGGTCTAGTTCGCAAACTCAAACTTGGTTTCCTTTTCAAAGGAGAAGGTGTCACTCAGTTTCATGA 1890 0.3751 MGVVTLGELKPSVSGRRTFRPSSSIRHATEWPISDVSSDLTIQIGASTFSLHKFPLVSRSGRFRKLLSEVKDSKVPRVSLPTVPGGVEAFELAAKFCYGINIDFTLSNIAMLHCISYFLEMTEEFSEKNLVTRAESYLKEIVLPNTSSIINVLHHCENLVPLSEEINLVNRLINAIANNACKEQLTSGLLKLDHTFPSKTTSMMEPETPSDWWGNSLNVLGLDFFERVVSVMKSKGLKQELISKILVNYAHNSLQGTTSVSSLDIELQKKQKVIVETIVRLLPTQSRKSPIPMAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNSPSNTHSTMYDIDSILRIFSTFLNLDDVDDEDSDFRDESQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDLNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQISFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPAHKFFKSFAKKLSKLNAIFRINSTRGSGTGRSSSQTQTWFPFQRRRCHSVS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04197 629 Pfam BTB/POZ domain 37 140 IPR000210 GO:0005515
Tsu07g04197 629 ProSiteProfiles NPH3 domain profile. 211 498 IPR027356 -
Tsu07g04197 629 Coils Coil 538 572 - -
Tsu07g04197 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Tsu07g04197 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Tsu07g04197 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 617 - -
Tsu07g04197 629 PANTHER OS12G0117600 PROTEIN 25 617 IPR043454 -
Tsu07g04197 629 Pfam NPH3 family 211 474 IPR027356 -
Tsu07g04197 629 Gene3D Potassium Channel Kv1.1; Chain A 24 143 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04197 Tsu-Chr7 47620505 47624231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04197 1 448 EF-hand Containing Proteins AT2G47860 57.322 4.95e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04197 - - zju:107426026 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04197 07 47620505 47624231 Tsu01g03829 01 46082319 46086511 PCT