Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04193 ATGACCACAGTCACAAGCTTGGTTGGTGAAAAGCCAGTAGTGATATTCAGCAAGAGTACATGTTGCTTAAGTCACTCAGTAGCATCACTGATACGTAGCTTTGGCGCAAACCCAATTGTTTATGATCTTGATAAAATCGAAAATGGGTCGCAGATTGAAGGTGAATTGCTTCAAATGGGGATTAAACCAAGTGTACCTGCTGTTTTCATTGGACAACAATTCAGAGGTGGTTCTAAGAAAATTATGAGTCTTCATGTTAGGAATGAATTGGTGCCAATGTTGAAGGATGCTGGTGCTATATGGATTTGA 309 0.3981 MTTVTSLVGEKPVVIFSKSTCCLSHSVASLIRSFGANPIVYDLDKIENGSQIEGELLQMGIKPSVPAVFIGQQFRGGSKKIMSLHVRNELVPMLKDAGAIWI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04193 102 Pfam Glutaredoxin 13 74 IPR002109 -
Tsu07g04193 102 SUPERFAMILY Thioredoxin-like 3 101 IPR036249 -
Tsu07g04193 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Tsu07g04193 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Tsu07g04193 102 Gene3D Glutaredoxin 1 101 - -
Tsu07g04193 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Tsu07g04193 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Tsu07g04193 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04193 Tsu-Chr7 47580364 47581078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04193 1 102 Miscellaneous Gene Families AT4G15690 50.980 8.14e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04193 K03676 - gmx:100789514 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03830 01 46096657 46097054 Tsu07g04193 07 47580364 47581078 PCT