Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03830 ATGGATAGAGTGAAGGATTTAGCATCAAAGAAAGCTGCAGTTATATTCACAAAGAGTTCATGCTACATGTGTCATAGCATAACACAATTGTTCTATGAATTAGGAGCAAGTCCTGCAGTGCATGAGCTTGATAATGAACCATATGGTAGAGAAATGGAAAGAGCTTTAAGGAGTCTTGGATGTAACCCTTCAGTTCCAGCAGTTTTCATTGGTGGAAAATTTGTAGGGTCATCAAAAGATGTGATTTCTCTTCATGTTGATGGTTCTCTCAAACAAATGCTTATGGCTGCTAGAGCCATTTGGTTCTAG 309 0.3851 MDRVKDLASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDNEPYGREMERALRSLGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAARAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03830 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Tsu01g03830 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Tsu01g03830 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Tsu01g03830 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Tsu01g03830 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Tsu01g03830 102 Gene3D Glutaredoxin 1 100 - -
Tsu01g03830 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Tsu01g03830 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Tsu01g03830 102 Pfam Glutaredoxin 14 75 IPR002109 -
Tsu01g03830 102 CDD GRX_GRXh_1_2_like 12 93 - -
Tsu01g03830 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03830 Tsu-Chr1 46096657 46097054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03830 1 102 Miscellaneous Gene Families AT4G15690 48.039 5.25e-34 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03830 K03676 - gmx:100305876 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03830 01 46096657 46097054 Tsu01g03830 01 46096657 46097054 ECH
Tsu07g04191 07 47565466 47565777 Tsu01g03830 01 46096657 46097054 PCT
Tsu01g03830 01 46096657 46097054 Tsu07g04193 07 47580364 47581078 PCT