Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04190 ATGGATAGAGTAAAGGATTTAGCATCAAAGAAAGCAGCAGTTATATTTACAAAGAGTTCATGTTACATGTGTCATAGCATCAAGCAACTTTTCTATGAACTTGGAGCAAGTCCTGCAGTGTATGAATTAGACAATGATTCATATGGTAGAGAAATGGAATGGGCTTTGAGGAGTAATTTTGGATGTAACCCTTCAGTCCCAGCAGTGTTTATAGGTGGAAAATTTATAGGATCTTCAAAAGATGTTATATCTCTTCATGTTGATGGTTCTCTTAAACAATTGCTTATGGATGCAAAGGCCATTTGGTTTTAG 312 0.3558 MDRVKDLASKKAAVIFTKSSCYMCHSIKQLFYELGASPAVYELDNDSYGREMEWALRSNFGCNPSVPAVFIGGKFIGSSKDVISLHVDGSLKQLLMDAKAIWF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04190 103 Pfam Glutaredoxin 14 76 IPR002109 -
Tsu07g04190 103 SUPERFAMILY Thioredoxin-like 1 102 IPR036249 -
Tsu07g04190 103 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Tsu07g04190 103 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 102 - -
Tsu07g04190 103 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Tsu07g04190 103 ProSiteProfiles Glutaredoxin domain profile. 1 102 - -
Tsu07g04190 103 CDD GRX_GRXh_1_2_like 12 94 - -
Tsu07g04190 103 Gene3D Glutaredoxin 1 101 - -
Tsu07g04190 103 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Tsu07g04190 103 PRINTS Glutaredoxin signature 59 72 IPR014025 -
Tsu07g04190 103 PRINTS Glutaredoxin signature 73 86 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04190 Tsu-Chr7 47562416 47562727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04190 1 103 Miscellaneous Gene Families AT4G15700 47.573 8.45e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04190 K03676 - gmx:100788094 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04190 07 47562416 47562727 Tsu01g03831 01 46110378 46110857 PCT