Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03831 ATGGAGAAGGTGATGAGGTTGGCTACAGAAAAAGGTGTGGTGATTTTCACAAAGAGTTCTTGTTGTCTATGTTATGCAGTGAATGTTTTATTTCAAGAAGTTGGAGTGTACCCTGTGGTACATGAAATTGACAAAGATCCTGATTGCAAAGAAATGGAGAAAGCTATAAAAAGATTGGGTTGTAATGCACCTGTCCCTGCAGTATTCATTGGAGGAAGACTTGTAGGGTCCACTAATGAAGTAATGTCCCTCCACTTAAGTGGTTCACTCGTTCCACTATTGAGGCCATATAGAATGTAA 300 0.3967 MEKVMRLATEKGVVIFTKSSCCLCYAVNVLFQEVGVYPVVHEIDKDPDCKEMEKAIKRLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLVPLLRPYRM 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03831 99 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Tsu01g03831 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 96 IPR011905 -
Tsu01g03831 99 CDD GRX_GRXh_1_2_like 13 93 - -
Tsu01g03831 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Tsu01g03831 99 Gene3D Glutaredoxin 1 98 - -
Tsu01g03831 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Tsu01g03831 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Tsu01g03831 99 Pfam Glutaredoxin 13 75 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03831 Tsu-Chr1 46110378 46110857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03831 1 95 Miscellaneous Gene Families AT4G15670 49.474 1.12e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03831 K03676 - gmx:100500442 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03831 01 46110378 46110857 Tsu01g03831 01 46110378 46110857 ECH
Tsu07g04190 07 47562416 47562727 Tsu01g03831 01 46110378 46110857 PCT
Tsu01g03831 01 46110378 46110857 Tsu07g04191 07 47565466 47565777 PCT