Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04173 atgagaggACCAGTGATTGTAACAAAGAGTGGTggatgtggtggtggtggtagtaGTGGTTTAAAAGGAAGAAGAGGAAACAACGGCAGCGGCGAAGAAGTGTCGCCGGCGGCTTTAATGTTGGCTGCTTTAAAGAAATCAATGGTGGCCTGTAGTGTTGAGAGTCCTGACGATGTAATCTCAGCCGTTCATCATCCAATGGAGATTGGTTGGCCTACAAACGTTAAACATGTTAGCCATGTTACTTTTGATAGGTTTAATGGATTTTTGGGTCTTCCTCTTGAGTTAGAGGTTCATGTTCCTGTTCCTGTTCCCAGTGCTAGTGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTTCCCACAATTCTGCTACTAATGCAAGAGAGATTATACTCACAAGGAGGACTAAAGGCTGAAGGAATATTTCGAATAAATCCCGAAAACGGTGAAGAGGAACATTTGAGGGAGCAATTGAATAGTGGCATTGTACCAAATGACATTGATGTTCATTGTTTGGCTGGTTTAATAAAAGCATGGTTTAGGGAACTTCCTTCAGGAGTGTTGGATGGACTTTCACCTGAACAAGTTCTTGAATGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAACAGTTGAATCCAGTTGAATCAGCTTTGCTTAATTGGGCTATTGAACTTATGGCTGATGTTGTAGTTGAAGAGGAGTATAATAAAATGGATGCTAGAAATATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCTCTAATGCACGCGGTCCAAGTGATGAATTTACTGAAGACACTAATATTGAAGACACTTCGAGATCGCGAAGATTCATTAACATCAGAATATTCATCCATGTCATCTCATTCATCAGATCaccaatcagaagatgaagactaTGATAGTCAAGAAATGGATACCAGTGGTGAAATGAAAAGGGCCAAGTTAGATTATGATAACATTGAAGAAGTTGCATCTGTTAGTGAAATAGAGGAATGTTTCTTAGAACAATTGGACGATGTTAAGACAAAACGATTCACAGAAGAGTTAGATAGCCCTACCAAAACTGAGGATTCTTGTCTCAGTTCCAGTTATAGAGACGGCTCGACAACAACTCTAACAGCTGAGGGATCAAATGCTGACACAACAAGTAGTCCATCAATAGAAAGTAAAGAAACCAATGACGTGGAGATGGTAGATAAATTTACCGATTCAGTTTCACTCTTGCCTTTGTTTGCATCTAGTTAA 1305 0.3793 MRGPVIVTKSGGCGGGGSSGLKGRRGNNGSGEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPVPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVELVKQLNPVESALLNWAIELMADVVVEEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREDSLTSEYSSMSSHSSDHQSEDEDYDSQEMDTSGEMKRAKLDYDNIEEVASVSEIEECFLEQLDDVKTKRFTEELDSPTKTEDSCLSSSYRDGSTTTLTAEGSNADTTSSPSIESKETNDVEMVDKFTDSVSLLPLFASS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04173 434 MobiDBLite consensus disorder prediction 299 326 - -
Tsu07g04173 434 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 434 - -
Tsu07g04173 434 ProSiteProfiles CRIB domain profile. 69 82 IPR000095 -
Tsu07g04173 434 CDD RhoGAP 131 281 - -
Tsu07g04173 434 MobiDBLite consensus disorder prediction 375 411 - -
Tsu07g04173 434 Pfam RhoGAP domain 131 265 IPR000198 GO:0007165
Tsu07g04173 434 Gene3D Rho GTPase activation protein 101 300 IPR008936 GO:0007165
Tsu07g04173 434 CDD CRIB 67 97 - -
Tsu07g04173 434 PANTHER MKIAA1688 PROTEIN 1 434 IPR044785 GO:0005096
Tsu07g04173 434 Gene3D CRIB domain 64 100 IPR036936 -
Tsu07g04173 434 SMART RhoGAP_3 128 291 IPR000198 GO:0007165
Tsu07g04173 434 ProSiteProfiles Rho GTPase-activating proteins domain profile. 114 299 IPR000198 GO:0007165
Tsu07g04173 434 MobiDBLite consensus disorder prediction 1 32 - -
Tsu07g04173 434 MobiDBLite consensus disorder prediction 367 415 - -
Tsu07g04173 434 SUPERFAMILY GTPase activation domain, GAP 110 288 IPR008936 GO:0007165
Tsu07g04173 434 SMART PBD_5 69 103 IPR000095 -
Tsu07g04173 434 Pfam P21-Rho-binding domain 68 96 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04173 Tsu-Chr7 47414136 47417692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04173 - K20642 gmx:100812700 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04173 07 47414136 47417692 Tsu01g03844 01 46254079 46257068 PCT