Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04168 ATGCTGAACGTGCTACGTGTGCACCTTCCTTCTGATATTCCCATTGTTGGGTGTGAGCTTACGCCTTATGTGCTTTTACGACGACCTGATAAAACCGTTACAACCGATGATGTTACCGAAACCTCTCCATTAGATGGACATTTTTTGCGCTATAAGTGGTATCGTGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTGCATCCATCCGAGCAGGCCACACTGCAGTGCCTAGGTTGTCTTAAGGCTAAAATACCAGTTTCCAAAAGTTATCATTGCACTCCAAAGTGTTTCTCAGATGCATGGCAGCATCACCGAGTCTTACATGACCGTGCTGCAAGTGCAGTAAATGAAAATGGAAATGAGGAGGAGGAGGTCTTTGGGAGATTTAATAATTCTGGGTCTGGGTCAATCAATACCGGCTTATCCTCCTCTGCATCTAGTACTAGCCTGACAAACGGAAATGTGTATCCTGCAACTGTTTCACAACGAAATGGCGGTGAAACCTGGTTTGAAGTTGGACGATCAAAGACATATACCCCATCAGCTGATGACATTGGTCATGTCCTTAAATTTGAGTGTGGTGTAGTTGATGCAGAGACAAAGCTTACTGTGGGGCACACAAACACTATACTAACTTCCCGGGTCATTCCTGCTCCCTCGCCTATCCCGCGCCAACTAATACCTGTTGACACAATGGGTAGTTTGGATGTGGATAGGCGTATAACGTCGTCGGGAACTTTTACTGTTTTATCATACAATATATTGTCTGATTCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCCTGGCCGTATCGCAGACAAAATTTGCTACGAGAAATAGTTGGTTACCGTGCTGATATTATATGTCTCCAGGAGGTTCAAAGTGATCATTACGATGAATTTTTCGCTCCTGAACTGGACAAACATGGATATTACGGTCTTtacaagagaaaaacaaatgaGGTATATAATGGAAACATAAATACAATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTCTCGCATGTGAAGAAATACGAgGTTGAGTTTAATAAGGCTGCACAATCTTTAACAGATGCCATGATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGgaTAATGTCGCACTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGGCTATTGATAATCCAGGGAAAAGACAGCTTCTGTGTGTGGCAAATACACATGTAAATGTACACCAAGATTTAAAGGATGTCAAGCTCTGGCAGGTGCACACTCTCTTAAAAGGATTGGAGAAAATTGCTGTCAGTGCAGACATTCCAATGCTGGTTTGTGGAGACTTCAATTCAGTTCCAGGAAGTGCTCCTCACGCACTTCTTGCAATGGGTAAGGTAGACCCATCCCACCCTGATTTAGCTGTTGACCCACTCAACATATTGCGTCCTCACAGCAAGTTGATTCACCAGTTGCCACTGGTAATGTATAGTAACACTTAA 1524 0.4206 MLNVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVTETSPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVSKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNNSGSGSINTGLSSSASSTSLTNGNVYPATVSQRNGGETWFEVGRSKTYTPSADDIGHVLKFECGVVDAETKLTVGHTNTILTSRVIPAPSPIPRQLIPVDTMGSLDVDRRITSSGTFTVLSYNILSDSYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQAIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLIHQLPLVMYSNT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04168 507 SUPERFAMILY DNase I-like 243 475 IPR036691 -
Tsu07g04168 507 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 503 - -
Tsu07g04168 507 Pfam Endonuclease/Exonuclease/phosphatase family 251 477 IPR005135 GO:0003824
Tsu07g04168 507 Gene3D Endonuclease/exonuclease/phosphatase 217 504 IPR036691 -
Tsu07g04168 507 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04168 Tsu-Chr7 47370616 47377540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04168 K12603 - gmx:100808935 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04168 07 47370616 47377540 Tsu01g01998 01 20361341 20367484 PCT