Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04167 ATGAACCTTCAATTTCAATATCGTGGCATTGCAAAAGTACGTTTAAAATGGGTAAAAAATCGAAGTCTAGATCACATAATCGACAAAGAAACCGATTTAAAAGCTGCATCACTTCTCAAAGACGCAATCAAACGTTCCTCCACCGGTTTCCTCACCGCCAAAACTTTCTCCGATTGGCAAAAGCTTCTCGGATTAACCATTCCCGTTCTCCGATTCATGCGAAGGTATCCAACTCTCTTTCACGAATTTCCTCACCCTCGTTGGAATTCTCTTCCTTGTTTCCGATTAACCGAAACTGCACAATTGTTAGATTCACAAGAACAGAGCATTTACACTCTTCACGAAAACGACACTGTTGAAAGACTCTCTAGGTTACTTATGATGACGAAAACGAGAACTGTTCCGTTACAGTCTCTTTATCCTCTTAAATTTGATTTAGGTTTTCCTGATTCTTTTGAGAAAACCCTAATTCCTAAATATCCTGAGAAATTTCAATTTGTTAAGGCTAGTAATGGTGTTTCCGCGGTTCGTCTTAAGGATTGGTGTGATGAATTTGCGGTTTCGGCTTTGCAGAGGAGTAATGAGGTTGAGTGTGATAGTGGGAGTGATCAGTATAGAGAGTTTAAGAGAGGGAAAACTGCGTTGGTTTTTCCGATGAGGTTTCCGAGAGGTTATGGTGGACAGAAGAAAGTTAGGTTTTGGATGGATGAGTTTCAGAAATTGCCTTATATTTCGCCTTATGCTGATTCGTCTAAGATTGATCCTAAAAGTGATTTGATGGAGAAACGTGTTGTTGGGGTTTTGCATGAGATTTTGAGTTTGTGTTTGCATAAGAAAACTAAGAGGAATTACTTGAGAAGTTTGAGGGAGGAGTTGAATCTTCCTCATAAGTTTACTAGGATTTTTACTCGATATCCTGGGATCTTTTATCTTTCGTTGAAGTGTAAAACGACTACTGTTACTCTTAGAGAAGGTTATGCGAGGGGAAAATTGGTGGATCCGCATCCTCTTGCTCGTCATAGAGATAACTTTTACCATGTGATGAGAACAGGGCTTCTTTATCGTGGTGATGGATCattgaaacttggggaagaAGATGCTTTGATGGTTGATTCTGTGGAGAATGATGAAATGGGGGATGGGGATTCTGAGGAGGAAGAAGTTGAAACAAGTGATGAATTCTCCGAGGATGAAGTTTCAGACTCGGATGATAaaattatttgCTCTCCACCAAACTGGTTGGCAAGTGATATAATGGGAATATGA 1266 0.3918 MNLQFQYRGIAKVRLKWVKNRSLDHIIDKETDLKAASLLKDAIKRSSTGFLTAKTFSDWQKLLGLTIPVLRFMRRYPTLFHEFPHPRWNSLPCFRLTETAQLLDSQEQSIYTLHENDTVERLSRLLMMTKTRTVPLQSLYPLKFDLGFPDSFEKTLIPKYPEKFQFVKASNGVSAVRLKDWCDEFAVSALQRSNEVECDSGSDQYREFKRGKTALVFPMRFPRGYGGQKKVRFWMDEFQKLPYISPYADSSKIDPKSDLMEKRVVGVLHEILSLCLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLARHRDNFYHVMRTGLLYRGDGSLKLGEEDALMVDSVENDEMGDGDSEEEEVETSDEFSEDEVSDSDDKIICSPPNWLASDIMGI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04167 421 MobiDBLite consensus disorder prediction 372 406 - -
Tsu07g04167 421 Pfam Plant organelle RNA recognition domain 18 351 IPR021099 GO:0003723
Tsu07g04167 421 PANTHER OS04G0546100 PROTEIN 5 403 - -
Tsu07g04167 421 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 5 403 IPR045040 GO:0003723
Tsu07g04167 421 MobiDBLite consensus disorder prediction 372 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04167 Tsu-Chr7 47363733 47366315 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04167 - - qsu:111998151 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04167 07 47363733 47366315 Tsu01g02880 01 34676313 34680003 PCT