Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04130 atggATTTGGAATCTTTCGACGATTCTTTAAATACCAATACATGCAAATGTCGCGACTGCAATTGTGAATGCTGCTGTTCCGAGCGGAGAACGGATTGGATCCGTTCGGTGAAACGGAAACATGAGGAGTTGGAAAAGGTGAAAAAGTTgaatggtggtggtgatggcGTTGTTCGTGTTGAAATTGGGGATGAATGTGTGGCGTTACGACAAGCGGTTAGTGGTCAGCAAAAGGCGATTCAGGATTTGTATTCTGAATTGGAGGAGGAGAGGAATGCTGCTTCATCTGCGGCGAATGAAACAATGTCGATGATATTGAGGTTGCAGACTGAGAAGGCTGAACTTGAAATGGAAGCACGGCAATTCAAGCGATTTGTTGAGGAGAGGACGAGTCATGATCAACAGGAGATTTTAGCTTTGGAGGAATTGTTGTATAAAAGGGAACAAACGATTCATTCGCTTACGTGCGAAATTCAGGCTTATAAACATAGATTGATGAGTTTTGGCTTAACTGAGTCAGAGGTGGAAGGTGATTATGATTTTCCACCTTATGAGTATCCTCCTTTGAAATGTAATGTAATGCACGCTGTTGCGGACACTGAgaatgatgatgtttttgacGTTGATGTTGAGAAGTATGCATTTGGGGAAACTCCTAGGGATCGTTTGAGGACTTTGGAGAATAGGATATCTCAAATGGAGAGAACTCCAACTTATAGTCAGATGGAAGGTGATTTCGGCACAAAGAATATTATAGAGAAGGTAATAGTCGGACAATCtcctaaaacaaatatacattCGAGGAAATTTTCATGTGACTCACCCTCGTTTGGCCCCGAGTTTGTGTCGGATTCTCCCAGATTCAATGGCAGCATTAAGAAGATGAATAATGGGTCGGAGGATTTCTCCAATTTTAAGAAGATGGATAATGTGTCTGAGACTGGTGATAATATGACTGATAGAGTTTACACTGTTGACTCTGAATTCAAAGGTGGAGTTGGTGGTTATGATGAGCATGTAACAACTCCAAGAGAGTTTGGAAATCAGGGCGAATTTGAAGATCCATATGTAAAGAAGCTTTACATAAGGCTTCAAGCACTTGAGGCGGATAGGGAATCAATGAGGCAGGCAATCATTTCCATGCGTACTGATAAAGCACAGCTTGTTTTGCTCAAGGAAATAGCTCAACACTTGTGCAAAGAGATGTCAGATCAGAGGAAAGTTACCGTGAAAACCTTTGTTGGTGGCGTCTCATTCTTCACAATCTTTAAGTGGGTTGCTTCAATTGTTTTCTGGAGAAAGAGAAGTCGTCAAATCAAGTATATGTTTGGTCTACCATCTAGCAGTTCCGGCATGCTAATGCTCCTTGACAAAGGACCCAATGTAAGGTCGTGGAGATATGTTTCAAGAGCACAATTGGGAGAATAG 1428 0.4013 MDLESFDDSLNTNTCKCRDCNCECCCSERRTDWIRSVKRKHEELEKVKKLNGGGDGVVRVEIGDECVALRQAVSGQQKAIQDLYSELEEERNAASSAANETMSMILRLQTEKAELEMEARQFKRFVEERTSHDQQEILALEELLYKREQTIHSLTCEIQAYKHRLMSFGLTESEVEGDYDFPPYEYPPLKCNVMHAVADTENDDVFDVDVEKYAFGETPRDRLRTLENRISQMERTPTYSQMEGDFGTKNIIEKVIVGQSPKTNIHSRKFSCDSPSFGPEFVSDSPRFNGSIKKMNNGSEDFSNFKKMDNVSETGDNMTDRVYTVDSEFKGGVGGYDEHVTTPREFGNQGEFEDPYVKKLYIRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKEMSDQRKVTVKTFVGGVSFFTIFKWVASIVFWRKRSRQIKYMFGLPSSSSGMLMLLDKGPNVRSWRYVSRAQLGE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04130 475 Coils Coil 357 384 - -
Tsu07g04130 475 ProSiteProfiles GTD-binding domain profile. 64 162 IPR007656 -
Tsu07g04130 475 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 450 - -
Tsu07g04130 475 PANTHER BNAANNG28530D PROTEIN 1 450 - -
Tsu07g04130 475 Coils Coil 73 118 - -
Tsu07g04130 475 Pfam Zein-binding 68 158 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04130 Tsu-Chr7 47102604 47106308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04130 - - gmx:100797605 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04130 07 47102604 47106308 Tsu07g04130 07 47102604 47106308 ECH
Tsu07g04130 07 47102604 47106308 Tsu01g02035 01 20891937 20895855 PCT