Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02035 ATGGATTCGGAAACAGTTCTATCTCCCAAGGATTTGTTGAAATGTTGTGACTGCGGATGTAGTTGCTCTTTGTTGGATCAAAATTCTGCAACTTGGATGCGTTCTGTTAAACGGAAGCATGATGAGTTTAAACTGGAAAACCAATTACCGGTGCCATCGGTTGCACGGGTTGAAATTGGGAATGAATGTATTGCCTTACGTGAGATGGTTGGTGTGCAACAGAGAACTATTCAGGATTTGAATGAGGAATTGGACGAGGAGAGAAATTCTTCGTCCACGGCTGCGAACGAGGCAATGTCGATGATCTTGAGGTTGCAGAGGGAAAAGGCAGAGATTCAAATGGAAGCTCGTCAATTCAAGCGTTATGCGGAGGAGAAAATGATGCATGATCAAGAGGAACTTATGTCTTTGGAAGATTTATTGTACAAGAGAGAACAGATAATTCAGTCACTTTCGTGCGAAGTTCAGGCTTACAAGCATAGAATGATGAGTTTTGGGTTCACTGAGGATGAGTTGGAGGGTGATCAATATGACATTCTTCCCTACGAATACCCTCCTTTAAAATGTGATGTCATGCATAATGACATGGATGCTGATAACGACGATACTGATATTGAGAAATATGCATTTGGCGAAACTCCTAATGACCGTTTGAAGAACTTGGAGAATAGGATTTCTCAAATGGAAAAAAGTCCCACTTACAGCCAGAAGGATGGAGATTTAATAGGAAAAAATGTTCTAGAGAAAGTAATTGTTGGACAATCTCCAAAATTGACGAGGCTCTCGAGGAAAGTTTCCTCTGACTCATCAGCATTCGGTGGGATGGGTAGAGAAATCGGTCCTGAGTTCCCTGTGGAGTCACCGGTGAACAATAGCAACTATAAGAAGGATTATTTCTCTCAGTCAGAGGACCATTCTAATTTGAAGAAGGTAGATAATGCTTCGGAAGGTGATGATACAACTGACAGAATTTATACAATCGACTCTGTTCATTCTGGGGCACCATATAATGGCTTTACAGGTTTCAAAGCTGGAGCTTTCGAAGATTATGCAACCACTCCAAAGGAATCGGGGAATCATCATGCTGAATTTGAGGATCCTTACATAAAGAAGCTTTACATGAGGCTTCAGGCACTTGAAGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGAGCACAGATAAAGCACAGGTTGTGTTATTGAAGGAGATAGCACAGCATTTGTGCAAAGAGATGTCACCGCAAAGAAAAATGAGTACCAGCAAGCCATATGTTGCTACAAGAACTCCATTCGCGTCAATTTTTAAGTGGGTCACATCAGTTGTCCTTTGGAGAAAGAAGGCGCAAGAAAGCAAGTATATGTTAGGGCTACCAACTGACAGTATGGGATTGCTGTTGCTCCTGGACAAAAGAACAAATGCAAGGCCATGGAGATGTATTTCAAGTACACAAGTGGGAGATTAA 1470 0.417 MDSETVLSPKDLLKCCDCGCSCSLLDQNSATWMRSVKRKHDEFKLENQLPVPSVARVEIGNECIALREMVGVQQRTIQDLNEELDEERNSSSTAANEAMSMILRLQREKAEIQMEARQFKRYAEEKMMHDQEELMSLEDLLYKREQIIQSLSCEVQAYKHRMMSFGFTEDELEGDQYDILPYEYPPLKCDVMHNDMDADNDDTDIEKYAFGETPNDRLKNLENRISQMEKSPTYSQKDGDLIGKNVLEKVIVGQSPKLTRLSRKVSSDSSAFGGMGREIGPEFPVESPVNNSNYKKDYFSQSEDHSNLKKVDNASEGDDTTDRIYTIDSVHSGAPYNGFTGFKAGAFEDYATTPKESGNHHAEFEDPYIKKLYMRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMSPQRKMSTSKPYVATRTPFASIFKWVTSVVLWRKKAQESKYMLGLPTDSMGLLLLLDKRTNARPWRCISSTQVGD 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02035 489 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 11 464 - -
Tsu01g02035 489 Coils Coil 70 125 - -
Tsu01g02035 489 MobiDBLite consensus disorder prediction 267 288 - -
Tsu01g02035 489 MobiDBLite consensus disorder prediction 300 320 - -
Tsu01g02035 489 Pfam Zein-binding 65 155 IPR007656 -
Tsu01g02035 489 PANTHER BNAANNG28530D PROTEIN 11 464 - -
Tsu01g02035 489 Coils Coil 369 389 - -
Tsu01g02035 489 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02035 Tsu-Chr1 20891937 20895855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02035 - - aprc:113872114 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02035 01 20891937 20895855 Tsu01g02035 01 20891937 20895855 ECH
Tsu07g04130 07 47102604 47106308 Tsu01g02035 01 20891937 20895855 PCT