Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04052 ATGGTAATTTCCACTATCGGCAAAACCATAACAACCGATCAAGAAGGTGGCGCCGCTACCATCTCCACCATACATCCAGATATAATTCAAACTCATATCCTCACGTGCCTCGACGGTCCTTCACTTGCTTCCGCATCAAGCACGTGCTCTCAGCTTAATAAACTCTCATCAAACGAGCATTTATGGAACAAAATTTGCAACTCCACGTGGCCTTCCACAAATACGACACGCGTCCGTCATGTAATTTCCACTTTCTCCAACACCTCTCGTTCTTTCTTCTCCGATTCTTTCTCAACCGTAACCGCTTGCTCGTCTCATCACCACCGCCACCGTACAAATCTCGAAACTACGCCGGATATTTTATCCGctgttgatttatttcaccGGAAACGGCTTATTTTATCAAAAGTGGTGGAGACTGAGACGGTTTCTGGATGGTTTAGATGTTCTCCGTTTCGGATTGATATTCTTGATCCGAAGGATTCGGTTGAGACGAATATGGAGTATCCGAGAAACGATGAAGAGTGTATGAATCTGGAAGAGGAATTGAGGATGAGTTGGATTGTGATTGATCCTAGAGGGAAACGTGCGGTGAATGTTTCGAGTGTGAAACCGGTGTCAGTTCACCGTCACTGGTTAACCGGAGATGTGAATGTGAGATTCGCGACGGTGTTACACGGTGGAGAGAGAGGATCGGCGACGGAAGTGACGGTTTGTAGTTTATTGGTGACGTTGGGAGGGGAAATGCAAGTGAAGGAAGTTTGTTTTCAGGTTGAGGATATGGATGGGATTAATTTAAATGGGAGGGATAGTTTGGGAATTTTACAGAGGGCTTTGGTAGGTGGAAGAGAAAGATTAAGGAACGAAAAGGAAGGAAAAGAAAGTTACGAGGAATTTGTGAAAAGGAAAATGGAAAGGAAAGAGAGAAAGTTGAGAATCGAAAGAAGGTTGGATATGCTTTGTGTAGGTCTAGCTACTTTGTTTGTCACGGCTTTTTGCGCTCTCTTTCTCTCGTGA 1017 0.4385 MVISTIGKTITTDQEGGAATISTIHPDIIQTHILTCLDGPSLASASSTCSQLNKLSSNEHLWNKICNSTWPSTNTTRVRHVISTFSNTSRSFFSDSFSTVTACSSHHHRHRTNLETTPDILSAVDLFHRKRLILSKVVETETVSGWFRCSPFRIDILDPKDSVETNMEYPRNDEECMNLEEELRMSWIVIDPRGKRAVNVSSVKPVSVHRHWLTGDVNVRFATVLHGGERGSATEVTVCSLLVTLGGEMQVKEVCFQVEDMDGINLNGRDSLGILQRALVGGRERLRNEKEGKESYEEFVKRKMERKERKLRIERRLDMLCVGLATLFVTAFCALFLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04052 338 Gene3D - 12 113 - -
Tsu07g04052 338 PANTHER OS12G0156500 PROTEIN 9 332 - -
Tsu07g04052 338 Pfam F-box-like 26 67 IPR001810 GO:0005515
Tsu07g04052 338 PANTHER F-BOX PROTEIN-RELATED 9 332 IPR045283 -
Tsu07g04052 338 SUPERFAMILY F-box domain 26 85 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04052 Tsu-Chr7 46493957 46494973 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04052 - - vra:106757292 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04052 07 46493957 46494973 Tsu07g04052 07 46493957 46494973 ECH
Tsu01g03723 01 44988368 44990102 Tsu07g04052 07 46493957 46494973 PCT