Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04013 ATGGCAAGAATGTCTCAAGAACCACTCATTGTTGGGAGAGTTATAGGTGAAGTTCTTGATTCCTTCACCACAAGCATGAAAATGACTGTGAGTTACAACAAGAAACAAGTCTTCAATGGTCATGAGTTTTTCCCTTCCACTATCAACATCAAACCAAAAGTTGAGATTGATGGTGGTGACATGAGATCCTTCTTCACACTGGTGATGACTGACCCTGATGTTCCTGGTCCTAGTGATCCTTATCTCAGAGAACACTTGCactgGATTGTGACAGATATTCCAGGAACAACAGATGCTACATTTGGCAAAGAAGTTGTAAGCTATGAGATACCAAAACCAAATATAGGGATACACAGGTTTGTGTTTGTTCTGTTCAAACAAAAAAGCAGAGATTCAGTGACAATAACACCATCTTCAAGGGATCATTTCAACACTCGTAACTTTGCTTCACAGAATAATCTTGGTCTTCCTGTTGCTGCTGTTTACTTCAATGCTCAGAGAGAAACTGCTGCAAGAAGACGCTAG 525 0.4 MARMSQEPLIVGRVIGEVLDSFTTSMKMTVSYNKKQVFNGHEFFPSTINIKPKVEIDGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVVSYEIPKPNIGIHRFVFVLFKQKSRDSVTITPSSRDHFNTRNFASQNNLGLPVAAVYFNAQRETAARRR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04013 174 SUPERFAMILY PEBP-like 13 168 IPR036610 -
Tsu07g04013 174 CDD PEBP_euk 26 165 IPR035810 -
Tsu07g04013 174 Pfam Phosphatidylethanolamine-binding protein 49 163 IPR008914 -
Tsu07g04013 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Tsu07g04013 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 173 IPR035810 -
Tsu07g04013 174 PANTHER PROTEIN TERMINAL FLOWER 1 3 173 IPR031114 GO:0003712|GO:0009910
Tsu07g04013 174 Gene3D - 1 174 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04013 Tsu-Chr7 46214210 46215452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04013 K06910 - pvu:PHAVU_001G189200g 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04013 07 46214210 46215452 Tsu07g04013 07 46214210 46215452 ECH
Tsu07g04013 07 46214210 46215452 Tsu01g02202 01 23087324 23091364 PCT