Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02202 ATGGGAAGTATCACTTCAGATCCTTTAATTCTTGGGAGAGTGATAGGAGATGTTATTGATTATTTCACCCCAACCGTAAAAATGACTCTAACTTACAACAACAAAGAAATCTTTAATGGATATGAAGTACCCTTTCCTTCAACAGTTAGCACCAAGCCAAGGATTCGGATTGGAGGAGGGGACATGAGGTCCCTCTTTACACtgATCATGATAGATCCGGATGTTCCTGGCCCAAGTGATCCTTATATGAAAGAACACTTGCACtgGATGGTGACAGACATACCAGGGACAACAGATGCCACATTTGGCAAAGAGCTGACAAGTTATGAAAAACCAAAGCCTGATATAGGAATCCACAGGTATGTATTTGTCCTATTCAAGCAAGAAAAGGGGAAAAAGCACTCGATTACTCCTCCTTTTTCAAGAGATCACTTCAACACACGTACTTTCTCTGCTCAAAATTACCTTGGTGCCCCTGTTGCTGCTGCTTTTTTCAATGCTAGAAGGGCAACGGCTCCTAGGAGACGCTAG 531 0.4218 MGSITSDPLILGRVIGDVIDYFTPTVKMTLTYNNKEIFNGYEVPFPSTVSTKPRIRIGGGDMRSLFTLIMIDPDVPGPSDPYMKEHLHWMVTDIPGTTDATFGKELTSYEKPKPDIGIHRYVFVLFKQEKGKKHSITPPFSRDHFNTRTFSAQNYLGAPVAAAFFNARRATAPRRR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02202 176 Gene3D - 2 176 IPR036610 -
Tsu01g02202 176 Pfam Phosphatidylethanolamine-binding protein 50 164 IPR008914 -
Tsu01g02202 176 CDD PEBP_euk 26 160 IPR035810 -
Tsu01g02202 176 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 66 88 IPR001858 -
Tsu01g02202 176 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 175 IPR035810 -
Tsu01g02202 176 PANTHER PROTEIN TERMINAL FLOWER 1 4 175 IPR031114 GO:0003712|GO:0009910
Tsu01g02202 176 SUPERFAMILY PEBP-like 13 168 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02202 Tsu-Chr1 23087324 23091364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02202 K06910 - qsu:112017308 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02202 01 23087324 23091364 Tsu01g02202 01 23087324 23091364 ECH
Tsu07g04013 07 46214210 46215452 Tsu01g02202 01 23087324 23091364 PCT