Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03956 ATGGCATCAAGGAAAGTCTACAAGGAAGACAGAGCTGAAGCAGCTGCAAAGCTAGCTGCAAAAGACATTGGTGACATAAACAGAACAAATGAACGAGAAGAAGGCTACTCACTTAATTCTGAAACACAGTTCAAACAAGCAAGAGCTGAGGCAGCTGCGAAACTTGCTGCGAAAGATCTTGAAGATGTTAACAGAGCAAAAGAAAGTGCATTCAATGCTACTTCTGCAACAGGGTATTATCAACAAGAAGAGAAACCAGGTGTTATTGGTTCTGTAGGTTCAATGTTTAAAGCTGCAAAAGATGCCGTTGTTGGTAAAAGTTACGAAGCTGGTGAAAAAGCTAAAGATACTACAGATTATGCAGCTCATAAAACAAGAGAGAATACAGATTATGCTGCAGAGAAAGCGAGGGAAGCGAAAGACACTACTGCGAATAAAGCAGGGGAGTATACAAACTATGCTGCAGATAAAGCGAGGGAAGCGAAAGACACTACTGCAAATAAAGCAGGGGAGTATACAAACTATGCTGCAGAGAAGGCGAGGGAAGCGAAAGATGCGACGTTTCAGAAGGCTGGAGAGTACAAGGATTATGCTGCAGAGAAAGCTAAGGAGGCGAAAGATGCGACTGTGCAGAAGGCTGGAGAAGCGAAGGATGCTACGGTGAATAAGGCTGGAGAGTATAAGGATTATACTGCTGAGAAGGCTAAAGAAGGGAAAGATACTACTGTGGGGAAGCTTGGAGAGTTTAAGGATTCAGTTATGGGTTTCTTCACTGGGAAGAAAGATGAAACTAAGGAAATGCTGGGTGGAACGGAAGAAGATGCTAGGTTGGGAGGAAGAGGAGGGTTGGGGAGAGAGAAAGTGGTGGTGAAGGTGAATGAGAGTAGGCCAGGATTGGTGGCGGATGGGCTGAGAGCAGCAGCAGGGGTGGACCAGGCTGATACGGGAGGTTTGGAGGAAGAAGGCACCATTCATGTTGAGCGTCGTCGTGAGAAAATGTGA 1002 0.4551 MASRKVYKEDRAEAAAKLAAKDIGDINRTNEREEGYSLNSETQFKQARAEAAAKLAAKDLEDVNRAKESAFNATSATGYYQQEEKPGVIGSVGSMFKAAKDAVVGKSYEAGEKAKDTTDYAAHKTRENTDYAAEKAREAKDTTANKAGEYTNYAADKAREAKDTTANKAGEYTNYAAEKAREAKDATFQKAGEYKDYAAEKAKEAKDATVQKAGEAKDATVNKAGEYKDYTAEKAKEGKDTTVGKLGEFKDSVMGFFTGKKDETKEMLGGTEEDARLGGRGGLGREKVVVKVNESRPGLVADGLRAAAGVDQADTGGLEEEGTIHVERRREKM 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03956 333 MobiDBLite consensus disorder prediction 311 333 - -
Tsu07g03956 333 PANTHER DAUER UP-REGULATED-RELATED 1 35 - -
Tsu07g03956 333 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 35 - -
Tsu07g03956 333 Gene3D - 115 171 - -
Tsu07g03956 333 Gene3D - 172 219 - -
Tsu07g03956 333 Gene3D - 220 276 - -
Tsu07g03956 333 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 40 275 - -
Tsu07g03956 333 Pfam Late embryogenesis abundant protein 173 216 IPR004238 -
Tsu07g03956 333 Pfam Late embryogenesis abundant protein 110 150 IPR004238 -
Tsu07g03956 333 Pfam Late embryogenesis abundant protein 151 187 IPR004238 -
Tsu07g03956 333 Pfam Late embryogenesis abundant protein 129 172 IPR004238 -
Tsu07g03956 333 Pfam Late embryogenesis abundant protein 207 248 IPR004238 -
Tsu07g03956 333 PANTHER DAUER UP-REGULATED-RELATED 40 275 - -
Tsu07g03956 333 MobiDBLite consensus disorder prediction 318 333 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03956 - - mtr:MTR_7g103280 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03956 07 45660139 45661361 Tsu07g03956 07 45660139 45661361 ECH
Tsu07g03956 07 45660139 45661361 Tsu01g02294 01 24345187 24346984 PCT