Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu01g02294 | ATGGCATCAAAGCAACCAAGACATgttgaagaaatcaaagtaaCAACAGATCACAACCCAAGTGCTACTTCAAACCAACAACACAATGATGAGAATCGTGGTGTAATTGGGTCAGTGATGAAGGCTGTTCATGACACTTATGAGAATGCAAGAGAAGCTGTAGTTGGTAAGAGAGACCCTGCAACAACAGAAGTCCATGTTTTCGACGACGACAATGATCTAGTCTCAGGTGGTGGTGAAGTTAGAGACATATCAGCAAATAAATCTCGTGGTGTTTATGATTCTGCAGCTCAAAAAGCGAAGGAAACTAAAGACGCGACAAAGGAGAAAACCAATGAGTATGCAGATTATGCAGGAGAGAAAGCAAAGGAAGCCAAGAACAAAGCAGGAGAGTATAATGCTTCTGCAGCTCAAAAAGCAAAGGAAACAAAAGACGCGACAAAGGAAAAAACCAATGAGTATGCAGATTATGCAGCTCAAAAAGCAAAGGAAACAAAAGACGCGACAAAGGAGAAAACCAATGAGTATGTTGATTATGCAGGAGAGAAAGCAAAGGAAGCTAAGAACAAAGCAGGGGAGTACAAAGACTATGCTGCAGAGAAGGCGAAAGAACGGAAAGATGCAACATTGAACAAAGCAGGGGAGTACAAAGACTATGCTGCAGAGAAGGCGAAAGAAGGGAAAGATGCAACATTGAATAAGTTGGGTGAGTATAAGGATTATACAGCTGAGAAGGCAAAAGAAGGGAAGGATAATACTGCATGGAAAATTGGAGAGATGAAAGATTCTGCTGTTGATGCTGCCAAAAGGGCTATAGGTTACTTGGGTGACAAGAAAGAGGAAACTAAGGAGAAAGCTTCAGAGACTGCTGAGGCTGCTAAACAGAAGACTGCAGAAACTACAGAAGCTGCTAAACAGAAAGCTGGAGAGACTGCAGAGGCTGCAAAACAGAAGGCTTCAGAGACTACAGAAGCTGCAAAACAGAAGGCTTCAGAAACTACAGAAGCTGCAAAACAGAAAACTTCAGAGACTGCTGAAGCTGCTAAACAGAGAACTGCAGATGCAAAAGACAAGACCAAGGAAAGGGTGAGTGAAGCAGAAGAAGAGGCAAGGAGGAAAGATAAAGGATTTGGAGAGGAAACATGGAGGCGTGGAAATGAGGGAGTGATAAGAATAGAAGATACTCGAACAGGAGCGGTGGCGGAGAAGCTGAGAGCGGCGGATCAGATGACGGGTCAGGCATTTAATGATGTTGGACCTTTGGATGATGAAGGGATTACTCGTGTTGGACTACTTGATATtaagaaaaagtga | 1314 | 0.4239 | MASKQPRHVEEIKVTTDHNPSATSNQQHNDENRGVIGSVMKAVHDTYENAREAVVGKRDPATTEVHVFDDDNDLVSGGGEVRDISANKSRGVYDSAAQKAKETKDATKEKTNEYADYAGEKAKEAKNKAGEYNASAAQKAKETKDATKEKTNEYADYAAQKAKETKDATKEKTNEYVDYAGEKAKEAKNKAGEYKDYAAEKAKERKDATLNKAGEYKDYAAEKAKEGKDATLNKLGEYKDYTAEKAKEGKDNTAWKIGEMKDSAVDAAKRAIGYLGDKKEETKEKASETAEAAKQKTAETTEAAKQKAGETAEAAKQKASETTEAAKQKASETTEAAKQKTSETAEAAKQRTADAKDKTKERVSEAEEEARRKDKGFGEETWRRGNEGVIRIEDTRTGAVAEKLRAADQMTGQAFNDVGPLDDEGITRVGLLDIKKK | 437 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Tsu01g02294 | 437 | Gene3D | - | 192 | 237 | - | - | |
| Tsu01g02294 | 437 | Gene3D | - | 79 | 133 | - | - | |
| Tsu01g02294 | 437 | Gene3D | - | 134 | 185 | - | - | |
| Tsu01g02294 | 437 | Gene3D | - | 238 | 376 | - | - | |
| Tsu01g02294 | 437 | PANTHER | DAUER UP-REGULATED-RELATED | 155 | 190 | - | - | |
| Tsu01g02294 | 437 | PANTHER | DAUER UP-REGULATED-RELATED | 23 | 128 | - | - | |
| Tsu01g02294 | 437 | PANTHER | DAUER UP-REGULATED-RELATED | 189 | 429 | - | - | |
| Tsu01g02294 | 437 | PANTHER | DAUER UP-REGULATED-RELATED | 128 | 167 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 95 | 128 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Tsu01g02294 | 437 | Coils | Coil | 434 | 437 | - | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 155 | 193 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 136 | 176 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 239 | 271 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 178 | 216 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 195 | 238 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 94 | 131 | IPR004238 | - | |
| Tsu01g02294 | 437 | Pfam | Late embryogenesis abundant protein | 217 | 260 | IPR004238 | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 274 | 292 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 342 | 387 | - | - | |
| Tsu01g02294 | 437 | Coils | Coil | 338 | 376 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 16 | 33 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 69 | 149 | - | - | |
| Tsu01g02294 | 437 | MobiDBLite | consensus disorder prediction | 274 | 387 | - | - | |
| Tsu01g02294 | 437 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 155 | 190 | - | - | |
| Tsu01g02294 | 437 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 189 | 429 | - | - | |
| Tsu01g02294 | 437 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 23 | 128 | - | - | |
| Tsu01g02294 | 437 | PANTHER | EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED | 128 | 167 | - | - | |
| Tsu01g02294 | 437 | Coils | Coil | 276 | 318 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu01g02294 | - | - | gmx:100786618 | 363.999 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu01g02294 | 01 | 24345187 | 24346984 | Tsu01g02294 | 01 | 24345187 | 24346984 | ECH | |
| Tsu07g03956 | 07 | 45660139 | 45661361 | Tsu01g02294 | 01 | 24345187 | 24346984 | PCT |