Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03941 ATGTCTCCGGCAATGGCGATGAATGATGAAAGAATTGATGATAGTCATGCAATAGAAAATGAATATCATAAAGGAGTGAAGCATTTGTATGAGAAAGGTTTTCTTCACAAGGTACCAAAGAAGTATATATTTCCTCCTACTGAAAGACCAACAAGTATTGATGATTCAAATGTTGCTAAGGAAAAACTTCAGTTACCAATTATTGATTTTGCTGATCTTATTGGTCCAAATAGGCCACAAGCTCTTCAGTCACTAGCCAATGCTTGTGAGAAATATGGATTTTTCCAGCTAGTAAATcacaacatatcaaatgataTCACAAGGTGCATGGTAGATGTTGTAGGAAGGTTCTTTGATCTTCCATTAGAGGAAAGAGCTAAGTACATGACAACTGATATGAGAGCACCTGTAAGATATGGGACCAGTTTCAGTCAAACAAAAGACTCTGTCTTCTGTTGGAGAGATTTCTTGAAACTCATTTGTCAACCTGATTACATTCCTCATTGGCCTGCTTCCCCATTGGACTTTCAGGAAGTGGTAGCCACCTATACACAAGAAACCAAACATTTGTTCATGTCAATAATGGAAGCCATTCTAGAAAGTTTAGGAATTATGGAAGACAACcaagaagaagaaaccaaagaaaatgacaacaataataataataatattatgaaagaattgGACAATGGTAGCCAAATGTTAGTAACAAATTTCTACCCACCATGTCCTGAACCAAACCTAACCTTAGGAATGCACCCTCATTCTGATTATGGTTTCCTCACACTTCTCCTTCAAGATGAAGTTGAAGGTTTGCAAATTCAATTTCAAGATAAATGGCTCACTGTTCAACCTATTCCTAATGCTTTTGTTATCAATATTGGTGATCATTTAGagATATTTAGCAATGGAAAATACAAGAGTGTCTTACACAGAGTTATGGTGAATGAAGCTAAGAGTAGAGTATCGGTTGCTTCGCTACATAGTCTTCCCTTTGAATGTACTGTGAGACCGTCGCCAAAACTCATCGACGAAGAGAATCCAAAGCATTACATGGACACAGATTTTGGTAGCTTTTTAGCATATGTGTCTACTAGAGAAACCAAGAAAAAGGATTTCTTAGAGTCCAGAAAATTGACATACACATAA 1149 0.3481 MSPAMAMNDERIDDSHAIENEYHKGVKHLYEKGFLHKVPKKYIFPPTERPTSIDDSNVAKEKLQLPIIDFADLIGPNRPQALQSLANACEKYGFFQLVNHNISNDITRCMVDVVGRFFDLPLEERAKYMTTDMRAPVRYGTSFSQTKDSVFCWRDFLKLICQPDYIPHWPASPLDFQEVVATYTQETKHLFMSIMEAILESLGIMEDNQEEETKENDNNNNNNIMKELDNGSQMLVTNFYPPCPEPNLTLGMHPHSDYGFLTLLLQDEVEGLQIQFQDKWLTVQPIPNAFVINIGDHLEIFSNGKYKSVLHRVMVNEAKSRVSVASLHSLPFECTVRPSPKLIDEENPKHYMDTDFGSFLAYVSTRETKKKDFLESRKLTYT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03941 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 164 IPR026992 -
Tsu07g03941 382 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 379 - -
Tsu07g03941 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Tsu07g03941 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 379 - -
Tsu07g03941 382 SUPERFAMILY Clavaminate synthase-like 24 366 - -
Tsu07g03941 382 PRINTS Isopenicillin N synthase signature 85 102 - -
Tsu07g03941 382 PRINTS Isopenicillin N synthase signature 255 276 - -
Tsu07g03941 382 PRINTS Isopenicillin N synthase signature 290 316 - -
Tsu07g03941 382 Pfam 2OG-Fe(II) oxygenase superfamily 233 328 IPR044861 -
Tsu07g03941 382 Gene3D - 16 362 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03941 Tsu-Chr7 45521190 45524223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03941 24 354 Glycosyltransferase AT5G59530 32.174 1.28e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03941 - - gmx:100778488 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03941 07 45521190 45524223 Tsu07g03941 07 45521190 45524223 ECH
Tsu07g03941 07 45521190 45524223 Tsu01g02314 01 24679461 24682647 PCT