Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03914 ATGATTCTAATGACAAGACTTGAGATAATTAGGGTTGAGATAGAGTTCAGATACGCTGATGGATACGGTCCTCCGGCGAATAACGCCAATCAAACGGAAGCGGTGGTTGTGCCTCCGCCTTCTGGAACAATCGAACCGCTTCCGTTGTTTCGCGATGTGCCGGTTTCTGAGAGGCAGAATTTGTTTATCCGTAAGCTTCAGATTTGTTGCCACACTTTGGATTTCACCGATACGATGAAATCGGTTAGGGAGAAAGAAATTAAGAGACAATCGTTGATGGAATTGGTTGAATTTATTCAATCTGGTTCGAGTAAGATAAATGAGATTTGTCAGGAAGAGATGATCAAAATGGTGTCGGTGAATATTTTCCGGTGTCTGCCTCCGGCGTTTCATGAGAATACCGGACAAGATGCTACCGATCCGGAAGAGGAGGAACCGTGTTTGGAGCCGGCTTGGCCTCATTTACAGCTCGTTTATGAGCTTCTTCTTAGATATGTTGTTTCATCTGATACTGATACAAAGGTAGCTAAACGTTACATTGATCATTCATTTGTGCTTAAATTGCTTGATTTGTTTGATTCTGAGGATCCTAGAGAACGTGAGTATGTGAAAACTATCTTGCATCGTGTTTATGGAAAATTTATGGTTCATAGACCTTATATTAGGAAGGCTATTAACAACATATTTTATCGGTTTATATATGAAACTGAGAGACATAGCGGGATTACTGAGCTTCTTGAGATTCTCGGGAGTATCATTAATGGGTTCGCGTTGCCCATGAAGGAGGAGCATAAGTTGTTTCTTGTGAGGGCGTTGTTGCCTTTGCATAAACCGAAACCTGTTTCTGTGTATCATCAGCAGTTGTCTTACTGCATCTCTCAGTTTGTTGAGAAGGATTATAAGCTAGCGGATACTGTTATTAGGGGTTTGTTGAAATACTGGCCTGTGACTAATTGCCAGAAGGAAGTTCTATTTCTCGGGGAACTGGAGGAAGTGCTGGAGGCTACGCAAGCTGCGGAATTCCAACGCTGCATGGTTCTTCTTTTTAGACAGATTGCTCGCTGCCTCAATAGTCCGCACTTTCAGGTTGCAGAACGAGCCCTCTTTTTGTGGAATAATGAGCACATTGTCGGTTTAATTGCCCAAAACAGGACTGTAATATTGCCCATTATATTCGAAGCATTGGAGAAAAATGTCCAGAGTCATTGGAACCAGGCTGTTAATGGGTTGACTGTGAATGTTAGGAAAATGTTCCTGGAAATGGATGCTGAATTGTTTGAGGAGTGCCAGAGGCAGTATTTGGAGAAAGTAGCTAAAGCCAAAGAGGTGGAAGAGCTGCGGGAATTGAATTGGAAGAGACTGGCAGATGCCGCTGCACAGAATGGGGCGGATATGGTGACAGCTTag 1407 0.43 MILMTRLEIIRVEIEFRYADGYGPPANNANQTEAVVVPPPSGTIEPLPLFRDVPVSERQNLFIRKLQICCHTLDFTDTMKSVREKEIKRQSLMELVEFIQSGSSKINEICQEEMIKMVSVNIFRCLPPAFHENTGQDATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYVKTILHRVYGKFMVHRPYIRKAINNIFYRFIYETERHSGITELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPVSVYHQQLSYCISQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVLLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRTVILPIIFEALEKNVQSHWNQAVNGLTVNVRKMFLEMDAELFEECQRQYLEKVAKAKEVEELRELNWKRLADAAAQNGADMVTA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03914 468 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 29 465 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g03914 468 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 29 465 - -
Tsu07g03914 468 Gene3D - 54 457 IPR011989 -
Tsu07g03914 468 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 47 458 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g03914 468 PIRSF PP2A_B56 26 467 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g03914 468 SUPERFAMILY ARM repeat 59 439 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03914 Tsu-Chr7 45281884 45292649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03914 K11584 - gmx:100798308 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03914 07 45281884 45292649 Tsu07g03914 07 45281884 45292649 ECH
Tsu07g03914 07 45281884 45292649 Tsu01g02344 01 25174921 25180651 PCT