Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03911 ATGGGTATACTACAAGACGATGTTGTGATTATCAGAGAACCAGAAAAAGAACATGAATCTACAATCATAACCGTTAACTGCCCCGACAAAACTGGTCTAGGTTCTGATTTATGTCGTATCATTCTCTTCTTTCATCTCACCATTCTTAGAGGAGATGTGTCAACTGATGGAAAATGGTGCTATATAGTATTTTGGGTAGtgggaaaagaaaaaacaagatgGAGTTTGTTGAAGAAGAGATTAATTGCTGCTTGTCCTACTTGTTCTTCTGCTTCTGGAATTTCTTATTATTGTTCTGATTTGCAGCCTCCAAAGCCtcatgatgtttttcttttgaagttttgtTGCAATGATCGGAAAGGTCTTTTACATgATGTCACAGAAGTTCTTTGTGAGCTAGAGCTTACCATAAAGAAAGTGAAGGTCTCTACTACACCCGACGGCAAAGTGTTGGATCTGTTTTTCATCACAGATACAAGAGAACTTCTACATACACAGAAGAGAAGGGATGACACAATCGATAAGTTAACAGCCGTTTTGGAGGATATCTTCACTACAATTGACATTGAATTAGTTGGCTCAGAAACTACTGTTTTTTCTCAAGCATCTTCATCCCTTCCAAATGCAATCAAAGatgtgtttgatttgcaaaatggGACTTCAACATCAGATTCTGTTTCTGTTGTGATGGACAATACATTGAGTCCTGCTCACACTCTTGTCCAAATTATGTGCCAAGATCATAAAGGTCTTCTTTTTGACATCATGAGAACTCTCAAGGACTTCAATATTCAGATATCGTACGGGAGATTCTCAAAGAAATCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGTTGATGGAAAAAAGATAGTTGATCCAAGCAAGAAGGAGTCTTTGTCGTCGCGTCTTAAGACAGAACTACTCCGTCCACTCAAAGTAGCGGTTGTGAGCAGGGGTCCCGATACAGAGTTGTTGGTTGCAAACCCTGTGGAATTGGCAGGCAAAGGAAGGCCTCTTGTTTTTCATGATATCACTCTTGCTCTCAAAATGCTCGGACTTTGCATCTTTTCGGCTGAAGTTGGAAGGCATGTGATCGGAGACCGCGAGTGCGAAGTTTATAGAGTCTTGCTTGATGAAGGGGAGGGGTTATCTTTACCAAGGAACAAAATTGAGAAGGGAGTTTGGAAAATGTTGATGGGTTGGGAGTGA 1218 0.3826 MGILQDDVVIIREPEKEHESTIITVNCPDKTGLGSDLCRIILFFHLTILRGDVSTDGKWCYIVFWVVGKEKTRWSLLKKRLIAACPTCSSASGISYYCSDLQPPKPHDVFLLKFCCNDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVLDLFFITDTRELLHTQKRRDDTIDKLTAVLEDIFTTIDIELVGSETTVFSQASSSLPNAIKDVFDLQNGTSTSDSVSVVMDNTLSPAHTLVQIMCQDHKGLLFDIMRTLKDFNIQISYGRFSKKSRGKCEIDLFIMQVDGKKIVDPSKKESLSSRLKTELLRPLKVAVVSRGPDTELLVANPVELAGKGRPLVFHDITLALKMLGLCIFSAEVGRHVIGDRECEVYRVLLDEGEGLSLPRNKIEKGVWKMLMGWE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03911 405 SUPERFAMILY ACT-like 107 190 IPR045865 -
Tsu07g03911 405 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 405 - -
Tsu07g03911 405 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Tsu07g03911 405 SUPERFAMILY ACT-like 18 81 IPR045865 -
Tsu07g03911 405 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 405 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03911 Tsu-Chr7 45251601 45254430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03911 - - gmx:100797226 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03911 07 45251601 45254430 Tsu07g03911 07 45251601 45254430 ECH
Tsu07g03911 07 45251601 45254430 Tsu01g02348 01 25227904 25231355 PCT