Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02348 ATGGGAATACTATACGACGACGTAGTGATTATCAGACCACCAGAAAAAGAAGGTGACCCAACTGTGGTTACTGTCAATTGTCCTGACAAAACCGGTCTTGGTTGTGACTTATGTCGTATCATACTCTTCTTTGGTCTTAACATTGTTAGAGGAGACGTGTCAACTGATGGGAAATGGTGTTACATAGTTTTCTGGGTGGTTGGGAAACAAAAGACAAGATGGAGTTTGTTGAAGAAGAGGATGGTTGAAGCATGTCCAACTTGTTCCTCAGCTTCTGGAATCTCTTATTATCGTTCCGATTTGCAGCCGCCTAAGCCTCCTgatgtttttcttttgaaattttgctgTCATGATAGGAAAGGACTGTTACATgATGTTACAGCGGTTCTTTCTGAGCTAGAGCTTACTATTACCAAAGTTAAGGTTTCTACTACACCTGATGGCAAAGTCATGGATCTGTTTTTCATCATCGATAACAGAGAACTTCTACATACAAAGAAGAGAAAGGATGATACGATCGAACAGATTCAAGAAGTTTTGGAGAATTCTATCCTTACTATTGACATTGAATTGGTTGGACCAGAAATTACTGCTTGTTCACAGGCATCTTCATTCCTTCCGGCTGCAATCACAGAAGACGATTATAATTTGGAATTGCCTGATTCAGTTCGAAGTGGAACACTCCGATCAGATTATGTCTCTATCATGATGGACAACTCGCTTAGTCCGGCTCATACCCTTGTCCAAATTATGTGCCAAGACCACAAAGGCCTTCTTTATGACATCATGAGAACTATTAAAGATTACAACATGAAGATTTCTTACGGGCGTTTCACTACAAAACCTAGACGAAAATGTGAGATGGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATAGTTGACCCAAACAAGCAGAATGCTTTGTCATCACGTTTTAGAACAGAACTATTTCGTCCACTCAGAGTAGCTGTTGTGAGCAGAGGCCCTGATATTGAGCTTCTGGTTGCAAACCCTGTTGAGTTGTCTGGCAACGGACGGCCTCTAGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTCGACATTTGCATCTTTACGGCTGAAATTGGGAGACATGTGATTGGAGACCGCGAATGGGAGGTTTATAGAATCTTGCTCGATGAAGGCGAGGGGTTGTCTGTTCCAAGAAACAAGATTGAGGAGGGAGTTTGGAAGATGTTGATGGGTTGGGAGTAA 1239 0.4084 MGILYDDVVIIRPPEKEGDPTVVTVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRMVEACPTCSSASGISYYRSDLQPPKPPDVFLLKFCCHDRKGLLHDVTAVLSELELTITKVKVSTTPDGKVMDLFFIIDNRELLHTKKRKDDTIEQIQEVLENSILTIDIELVGPEITACSQASSFLPAAITEDDYNLELPDSVRSGTLRSDYVSIMMDNSLSPAHTLVQIMCQDHKGLLYDIMRTIKDYNMKISYGRFTTKPRRKCEMDLFIMQADGKKIVDPNKQNALSSRFRTELFRPLRVAVVSRGPDIELLVANPVELSGNGRPLVFYDITLALKMLDICIFTAEIGRHVIGDREWEVYRILLDEGEGLSVPRNKIEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02348 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Tsu01g02348 412 Pfam ACT domain 112 167 IPR002912 -
Tsu01g02348 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Tsu01g02348 412 SUPERFAMILY ACT-like 18 79 IPR045865 -
Tsu01g02348 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Tsu01g02348 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Tsu01g02348 412 Gene3D - 108 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02348 Tsu-Chr1 25227904 25231355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02348 - - gmx:100816138 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02348 01 25227904 25231355 Tsu01g02348 01 25227904 25231355 ECH
Tsu07g03911 07 45251601 45254430 Tsu01g02348 01 25227904 25231355 PCT