Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03795 ATGGTGGGTATTATATCGTTGATAACTGGGATTGCTGGTCCAAGTGGGTTTGGATCAGCTTCAACTGCAGATCAAGTTACTGAAGGAATTGATGCTAGCAACCTTACTATAATTATCACAGGAGGAGCAAGTGGTATAGGTTTAGAGACAACAAGAGTGTTAGCTCTTAGAAAGGCACATGTCATAATTGCTGCAAGAAACTTGGAATCTGCAGAGAAAGCcaaacaacaaataacacagGAGAACAAATCTGCAAGAATTGATATAATGAAACTTGACCTATGCTCAACTAAATCTGTCAGATCATTTGTGGACAACTTCATTGCTCTTGATCTTCCTCTCAACATCTTAATAAACAATGCTGGAATAATGTTTTGCCCCTTCAAGCTATCAGATGAGGGTATTGAGATGCAATTTGCAACAAACCATCTTGGCCATTTCCTCTTGACAAATCTTCTTCTTGACAAAATGAAACAAACTGCAAAAACAACTGGAATAGAGGGAAGGATCATAAATCTATCATCAATTGCTCATAGATACACTTACTGCAGAAAGGGGATTAGATTTGATAAGATCAATGATaaaaaaggTTATTCTAAGAAGAAGGCATATGGACAGTCCAAGTTAGCCAACATATTACATGCAAATGAACTCTCTCGTCGCCTACAGGAAGAAGGTGTGAACATTACAGCTAATTCTGTCCACCCAGGAGTGATAATGACTCCTCTTATGAGATACTCTTCTTACCTTATGCACTTCTTTAAGGTCTTCAGCTTTTATATTTGGAAGAATGTTCCACAGGGAGCAGCCACTACATGCTATGTTGCACTTCACCCAAATGTGAAAGGTGTAACTGGAAAGTACTTTGTGGATTGCAATGAATTGAAGCCAAGTGCATTTGCCAAAAATAAACAGTTAGCTAAGAAACTTTGGGATTTCAGTAACACATtgatcaattcaatttcaaaagcTTGA 975 0.3631 MVGIISLITGIAGPSGFGSASTADQVTEGIDASNLTIIITGGASGIGLETTRVLALRKAHVIIAARNLESAEKAKQQITQENKSARIDIMKLDLCSTKSVRSFVDNFIALDLPLNILINNAGIMFCPFKLSDEGIEMQFATNHLGHFLLTNLLLDKMKQTAKTTGIEGRIINLSSIAHRYTYCRKGIRFDKINDKKGYSKKKAYGQSKLANILHANELSRRLQEEGVNITANSVHPGVIMTPLMRYSSYLMHFFKVFSFYIWKNVPQGAATTCYVALHPNVKGVTGKYFVDCNELKPSAFAKNKQLAKKLWDFSNTLINSISKA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03795 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Tsu07g03795 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Tsu07g03795 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 IPR002347 -
Tsu07g03795 324 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Tsu07g03795 324 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Tsu07g03795 324 PRINTS Glucose/ribitol dehydrogenase family signature 227 244 IPR002347 -
Tsu07g03795 324 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Tsu07g03795 324 CDD retinol-DH_like_SDR_c_like 36 311 - -
Tsu07g03795 324 Coils Coil 61 88 - -
Tsu07g03795 324 Gene3D - 26 321 - -
Tsu07g03795 324 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 320 - -
Tsu07g03795 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 297 IPR036291 -
Tsu07g03795 324 Pfam short chain dehydrogenase 36 181 IPR002347 -
Tsu07g03795 324 PANTHER RETINOL DEHYDROGENASE 3 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03795 Tsu-Chr7 44218014 44225029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03795 17 297 Acyl Lipid Metabolism Gene Families AT3G46170 23.891 9.43e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03795 K11153 - gmx:100801849 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03795 07 44218014 44225029 Tsu07g03795 07 44218014 44225029 ECH
Tsu07g03795 07 44218014 44225029 Tsu01g02553 01 28251739 28255867 PCT