Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03775 ATGGAGGAAGCATTGGAACTTGCACGCGCTAAAGATACAAAGGAAAGGATGGCTGGTGTAGAACGTCTCTACCAAATTCTAGAAGCTTCTAGAAAGAGTCTTACATCTTCTGAAGTTACCTCGCTCGTTGACTCTTGCATCGATCTCTTGAAGGATAACAATTTCCGTGTTTCTCAGGGCGCACTTCAATCTCTTGCTTCCGCCGCTGTTCTCTCCGGTGAACACTTTAAGCTTCATTATAACGCTCTTCTTCCTGCCGTTGTTGACCGTCTCGGTGATGGTAAACAGCCTGTTCGTGACGCCGCACGACGACTCCTTCTCACACTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCGCACAAAAGCTGGAGAGTCAGAGAGGAGTTTACCCGAACTGTAACATCTGCAATTAATCTATTTTCAGCTACCGAACTTCCACTTCAACGGGCTATCCTTCCTCCTGTTTTGCAGTTGCTGAATGACCCAAATCTTGCTGTTAGGGAAGCGGCTATTTTGTGCGTTGAGGAAATGTATACACAAGCTGGACCTCAATTTCGTGATGAACTTCACCGCTACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGTTAGAGAGTATTCAACCAAAAGTTCGCTCTTCAGATGGTATTTCAAGTGGTTATATTACTGGGGAAATTAACCCTAAACCCAAGAGAAATAGTCCAAAGGCCAAAAGTTCTTCAAGGGAGGCCTCTCTTTTTGGAGCAGAAGGTGATGTTACGGAGAAACCCATAGACCCTGTCAAGGTGTACTCAGATAAGGAGTTAGTCAGGGAAATCGAGAAGATTGCATCCATCCTTGTGCCTGAAAAAGACTGGTCTGTTCGTATTGCTGCTATGCAGAGAATCGAGGGTCTTGTTCTAGGAGGCGCTGCTGATTATCCATGTTTTCGAGGACTCCTTAAGCAACTTGGTGGACCTTTAAGTACACAATTGTCAGATAGAAGATCTAGCATTGTAAAACAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATATGCCGAAATGTTTATACCCGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTCCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCTGACTGTGCTAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGCTGTGAATATGCTCTTCTGGTCATAGAACATTGGCCGGATGCACCAGAAATACATCGTTCAGCAGAGTTATACGAGGATATGATTAAATGTTGCGTTTCAGATGCAATGAGTGAGGTACGATCTACTGCAAGAATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCTTATTTTCATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGCGGAATACACAGGCGGCATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGATGTCATTACCCAGTCAAGCCTCTGCTTTGTCTAATccacctggttatggaacatcTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGGCATCTGTCTCCTCTGGTGTACTTCTTTCACAGACAAAGCCACTTGGCAAGGGTACAGAACGTAGTTTGGAAAGTGTGTTACATGCAAGCAAACAGAAGGTCTCTGCTATTGAAAGCATGCTTAGAGGCCTGAATATGTCTGATAAGCACAATTCATCTACTCTCCGATCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGTCTCGTGATCCGCCTTTCCCAGCTGCTGTCTCTGCAACTAATCATTTGACAAGCTCTTCAACAACAGAACCTACTGCTTATGGTGTTTATAAAGGTAGCAACCGAAATGGTGGTCTGGGTTTGTCCGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAATTGAGCCTTTACCATCATCTTCCTCATATTCAACTAGAAGGCCTTCTGAAAGATTACAAGAAAGACGTTCTGTTGATGACAATAGTGACATTAGGGAGGCTAGGCGATTTATGAACCACACCACTGATAAGCAGTATATGGATGCTCCTTATAGAGATGGAAACTTTAGGGAATCACATAATAGTCACGTGCCTAATTTTCAGAGACCACTAGTGAGAAAGAATGTAGCTGGACGTATGTCTGCTGGCAGGAGgaagagttttgatgataaccaGTTATCTCCTGGAGAGATGTCAAGTTATGCAGATGGACCGGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTTCTAGGGTTGCAGCATTTAACTATCTTCACTCGTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTGATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTAGCAGATATTGTTCCAGCATGTCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCACATGTCTTTTCTCGGTTAATTGATCCTAAAGAGGTTGTTAGGCAGCCATGTTCAACAACATTGGACGTTGTTAGCAGAACTTACAGTATTGATTCTCTCTTACCTGCACTGTTACGTTCTCTAGACGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTGATTGAATTCGCAATCAATTCCTTTAACAAACATGCAATGAATGCAGAAGGTGCTGCTAATATTGGCATACTAAAATTGTGGCTCGCTAAGTTAACCCCTTTGGttcatgacaaaaatacaaagcTTAAAGAAGCAGCTATTACTTGCATTATATCAGTGTATACTCACTTCGATTCAACTGCAGTTCTTAATTTCATTCTGAGTTTGTCAGTGGAAGATCAAAATTCTTTGAGACGAGCCCTTAAACAGTACACCCCTCGCATCGAAGTAGACCTAGTAAACTATCTGCAGAACAAGAAAGAGCGACAACGTTCCAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACATCATCTGAAGACGGGATTGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGATATTCGGTCGGTTCCCTAGATAGTGATAGTGGCAGAAAGTGGAGCTCCCAGGATTCAACTATTTTGAAATCCAGTCTTGGTCCAGTAACTTCTGTTGAAAGTGATGACCATAATCATAACCATAATCTTGAGACTGATTCTAATTGTGATAATCTTCATTCAAAATCCAAAGATCATGCATATTCAGTCAATCCAATGGGTCAAGATTTCAGCTCTCAATCTAATCAACTTGGACATGTGGACAGTAGCATGGATTTCGAGGGCCTTTCAACTCCTCGTCTAGATGTTAATGGTCTGGTGTCATTAGAGCGTTTAAATGTTGGTGAAGGCTATGCACATGACAAAGAACTTCCTTCTGTATTGGAGCTTAATCATCACACAAATGAAGCTGTAAAGATTAACTCCATGACAGACACTGGGCCCAGTATTCCTCAAATTCTTCATATGATATGCAATGCTGATGATGGAAGCCCCATTTCTAGTAAACAGACTGCACTTCAACAGTTATTTGAAGCTTCTATTACAAATGATCAGGCTGTATGGACTAAGTACTTCAATCAAATTTTGACCGCTGTGCTTGAGGTGCTGGATGATTTGGATTCCTCAGTCAGAGAGCTTGCTCTTTCGTTGATAGTTGAAATGCTCAAAAACCAGAAAGATGCCCTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATTGTTCCTAAGGTTTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACCGAGGATGAGAAAACTCTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGCTCTCTCAGGAGGAATTGATGGCTCAGTTACCTTCGTTTCTGCCCGCCCTTTTCGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGGTATTTTGGGTCTTTTATCTGCAGTAA 4200 0.4164 MEEALELARAKDTKERMAGVERLYQILEASRKSLTSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHYNALLPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSATELPLQRAILPPVLQLLNDPNLAVREAAILCVEEMYTQAGPQFRDELHRYNLPSSLVKDINARLESIQPKVRSSDGISSGYITGEINPKPKRNSPKAKSSSREASLFGAEGDVTEKPIDPVKVYSDKELVREIEKIASILVPEKDWSVRIAAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVIEHWPDAPEIHRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLPSQASALSNPPGYGTSAIVAMDRSSSLSSGASVSSGVLLSQTKPLGKGTERSLESVLHASKQKVSAIESMLRGLNMSDKHNSSTLRSSSLDLEVDPPSSRDPPFPAAVSATNHLTSSSTTEPTAYGVYKGSNRNGGLGLSDIITQIQASKDSAKSSYHSNVEIEPLPSSSSYSTRRPSERLQERRSVDDNSDIREARRFMNHTTDKQYMDAPYRDGNFRESHNSHVPNFQRPLVRKNVAGRMSAGRRKSFDDNQLSPGEMSSYADGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLDVVSRTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYTHFDSTAVLNFILSLSVEDQNSLRRALKQYTPRIEVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGIVGFSRKAHYLGRYSVGSLDSDSGRKWSSQDSTILKSSLGPVTSVESDDHNHNHNLETDSNCDNLHSKSKDHAYSVNPMGQDFSSQSNQLGHVDSSMDFEGLSTPRLDVNGLVSLERLNVGEGYAHDKELPSVLELNHHTNEAVKINSMTDTGPSIPQILHMICNADDGSPISSKQTALQQLFEASITNDQAVWTKYFNQILTAVLEVLDDLDSSVRELALSLIVEMLKNQKDALENSVEIVIEKLLHVTKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKVFWVFYLQ 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03775 1399 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Tsu07g03775 1399 SUPERFAMILY ARM repeat 288 1394 IPR016024 -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 1102 1118 - -
Tsu07g03775 1399 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Tsu07g03775 1399 Coils Coil 1280 1300 - -
Tsu07g03775 1399 Pfam CLASP N terminal 282 497 IPR024395 -
Tsu07g03775 1399 Pfam CLASP N terminal 800 994 IPR024395 -
Tsu07g03775 1399 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Tsu07g03775 1399 PANTHER PROTEIN, PUTATIVE-RELATED 28 1393 - -
Tsu07g03775 1399 PANTHER CLASP 28 1393 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 631 649 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 674 718 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 1096 1118 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 599 649 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 222 260 - -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 599 616 - -
Tsu07g03775 1399 SUPERFAMILY ARM repeat 5 399 IPR016024 -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 674 698 - -
Tsu07g03775 1399 Gene3D - 796 1018 IPR011989 -
Tsu07g03775 1399 SMART TOG_3 279 511 IPR034085 -
Tsu07g03775 1399 SMART TOG_3 3 224 IPR034085 -
Tsu07g03775 1399 SMART TOG_3 781 1023 IPR034085 -
Tsu07g03775 1399 Gene3D - 1193 1398 IPR011989 -
Tsu07g03775 1399 Gene3D - 264 503 IPR011989 -
Tsu07g03775 1399 MobiDBLite consensus disorder prediction 699 718 - -
Tsu07g03775 1399 Gene3D - 1 222 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03775 Tsu-Chr7 43992309 44006592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03775 K16578 - gmx:100796697 2351.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03775 07 43992309 44006592 Tsu07g03775 07 43992309 44006592 ECH
Tsu07g03775 07 43992309 44006592 Tsu01g02566 01 28456553 28470612 PCT