Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02566 ATGGAGGAAGCACTGGAACTGGCACGTGCCAAGGACGCAAAGGAACGAATGGCTGGTGTAGAGCGTCTCCATCAAGTTCTAGAAGCTTCTAGAAAGAGTTTAACTTCAACTGAAGTTACTTCTCTCGTCGATTGTTGCTTGGATCTCTTGAAGGATAGTAGTTTTAGGGTTGCACAAGGTGCGCTTCAAGCTTTGGCTTCCGCCGCCGTTCTCTCCGGCGATCATTTCAAACTTCACTTCAACGCGCTTGTTCCTGCTGTTGTTGATCGCTTAGGTGATGCTAAACAGCCTGTTCGTGATGCTGCTAGAAGGCTCTTGCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCTGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAGGAGTTTGCGCGAACTGTGACATCTGCAATTGGTCTATTTTCATCCACTGAACTGCCCCTTCAACGGGCTATTCTTCCTCCAACTTTGCAATTGCTGAGTGATCCAAATCCTGCTGTCAAGGAAGCAGCTATTCTGTGCATTGAGGAAATGTTTGCGCAAGCTGGGTCTCAATTTCGCGATGAACTTCAGCGCCACAATCTCCCTTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGGATTCAACCAAAAGTTCAGTCTTCAAATGGTATTTCTAGTGGTTATAATATCCCTGGAGAAATTAATTCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAAGGAGACATCTCGTTTTAGAGGAGAAGGTGATATCACTGAGAAAGGCGTAGAACCTATCAAGGTGTATTCGGAGAAGGAATTTATCAGGGAAATCGAGAAGATTTCATCTACCCTAGTACCAGAAAAGGACTGGTCAGTACGAATTGCTGCCCTGCAGAGAATCGAAGCTCTTGTTTTGGGAGGAGCTGCTGATTATCCATGTTTTTTTGGAATCCTAAAACAGCTTATTGGACCTTTAAGCACACAACTGTCAGATCGTAGGTCTACCATTGTGAAGCAGGCATGCCATCTATTATGCTTTTTGTCGAAAGACCTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTACGTAACTGCAAAGTTGCTCGTGTGCTTCCTCGAATAGTTGATTGTGCAAAAAATGATCGCAGTGCAATACTTCGTGCAAGGTGCTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAGCGATCAGCAGATTTATACGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGCGAGGTGCGGTCGACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGTCGCCTATTTTCATCCTTTGACCCTTCTATTCAAAGGTTAATAAATGAAGAGGATGGAGGCAAACATAGGCGACATGCATCGCCTTCCATTCGTGATAGAAGTGCACCGATGTCATCAACTCCTAATCTAACTGGTTATGGAACTTCAGCTATTATTGCAATGGACAGAAGTTCTAGTTTATCATCAGGGACATCTATGTCCTCCGGTGTTCTTCTTTCACAAGCTAAGCCACTTGGTAAAGGTACAGAACGTAGTTTAGAAAGTGTACTGCATGCAAGCAAACAGAAGGTCAGTGCTATTGAGAGCATGCTTAGAGGTTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGAGATCCCCCATTCCCTGCTGCTGTTTCAGCCTCAAATCATCTGACTACCCCTTTAACAACAGAATCATCTGGTTTGGGTGCCAATAGAGGTAGTAGCCGGAACGGTGGTTTGGGTTTGTCTGATATAATCACCCAAATTCAAGCTTCCAAAGATTCTAGCAAGTTATCATATAATAGCAATGTTGGTATTGAGCCTTCATCAGATTTTTTATCATACACAAGTAAACGGGCTACTGAAAAGTTACAAGGAAGTTCTGTTGATGAAAATAGTTACATCCGGGAGACTAGGCGATATATGAACCCCAATGTGGATAGGCAGTATATGGATGCCCCTTATAGAGATGGGAACTATAGGGATTCACAGAATAGTTATGTGCCCAATTTTCAGAGGCCACTATTGAGAAAGAATGTAACTGCACGTGTATCAGCTGGCAGGAGAAGGAGTCTTGATGATAGTCAATTATCTATTGGAGAGATGTCAAATTATGCAGATGGACCGGCATCTCTTCATGAAGCTCTTAGTGAAGGACTTAGCTCAGGTTCTGACTGGTCTGCCAGGGTTTCTGCCTTTAATTACCTTCACTCGTTATTAGAGCAAGGTCAAAAGGGTATTCAAGAAGTTGTCCAGAATTTTGAGAAGGTAATGAAGCTGTTTTTTCAGCACTTGGATGACCCCCATCATAAAGTCGCACAGGCGGCTCTCTCCACACTTGCAGATATTATTCGTACATGCCGAAAGCCCTTTGAGGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGTTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTACGACTTTGGAGGCTATTGCTAAAACATACAGTATAGATTCCCTCTTGCCCGCATTGCTACGTTCTCTCGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAGTTTGCAATCGGTTCCTTTAACAAACATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTCACgataaaaacacaaaacttaaaGAAGCAGCTATTACATGCATTATATCAGTATACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGACCAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTGATGAACTATCTGCAGAACAAGAAAGAGCGGCGTAATAAGTCTTCATATGATCCATCTGATAATGTAGGAACATCCTCTGAAGAGGGATATGCTGGTTTGTCTAGGAAAGCACATTACATTGGGAGGTATTCTGGCGGTTCTCTAGATAGTGATGGTGGCAGGAAATGGAATTCCCAAGATTCAAACCTGGTTAAAGCCAGTCTTGGCCAATCAGCTTCTGATGAAACTGAGGAACACCTGTATCAGAATCTTCAGACTGATTGTGAAAGTAGTATTGTTGGTTCAAAAGCCAAAGTTAATTCTTACACAGTCAATTCAATGGATCAAAACTTTGGCTTTCAAACTGACCAACTTGGATATGTGGATAGTAGTATGAACTTCGAAGGTCTATCATCTGATGTGGATGCTAATGGTCTCAGGTCATTAGAACATTTAAACATTGCCGAAGACTTTGAACATCTCTCTGAATTGAACCATAATCATCACTCAGCTGAAGATGTGACGGTCAACCACCTGACGAACACAGGACTCAGCATTCCTCAAATTCTTAATATGATATGCAGTGGGGGTGATGGAAGCACTATTTCAAGCAAGCGGACTGCACTTCTACAGTTAGTTGAAGCTTCTGTAGAAAATGATCATTCTGTTTGGATCCAgTACTTCAATCAGATTTTGACTGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAACCAGAGAGCTTGCTCTTTCGTTGATACTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCTGTTGAGGTTGTACTTGAAAAGCTGCTTAATGTTACAAAGGATATTGTTCCCAAGGTCGCAAATGAAGCAGAGCACTGCCTGACAATTGTCTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTTATTATCCCTCTACTGGTTACCGAGGACGAGAAAACTTTAGTCACTTGCATAAATTGCTTGACCAAGATTGTGGGGCGGCTCTCTCAGGAAGAATTGATGGCTCAGTTACCATCATTTCTGCCTGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCGGATATCCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTACCATATTTGGAAGGGCTTAACAGCACACAGTTGAAGTTGGTTACCATTTACGCAAACCGAATCTCACATGCAAGGACAGGAAAATCAATTGATGCTGCTAACGATTAG 4290 0.4203 MEEALELARAKDAKERMAGVERLHQVLEASRKSLTSTEVTSLVDCCLDLLKDSSFRVAQGALQALASAAVLSGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPTLQLLSDPNPAVKEAAILCIEEMFAQAGSQFRDELQRHNLPSSLVKYINARLEGIQPKVQSSNGISSGYNIPGEINSKKSSPKAKSSSKETSRFRGEGDITEKGVEPIKVYSEKEFIREIEKISSTLVPEKDWSVRIAALQRIEALVLGGAADYPCFFGILKQLIGPLSTQLSDRRSTIVKQACHLLCFLSKDLLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKNDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPMSSTPNLTGYGTSAIIAMDRSSSLSSGTSMSSGVLLSQAKPLGKGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPLTTESSGLGANRGSSRNGGLGLSDIITQIQASKDSSKLSYNSNVGIEPSSDFLSYTSKRATEKLQGSSVDENSYIRETRRYMNPNVDRQYMDAPYRDGNYRDSQNSYVPNFQRPLLRKNVTARVSAGRRRSLDDSQLSIGEMSNYADGPASLHEALSEGLSSGSDWSARVSAFNYLHSLLEQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTLEAIAKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHAMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDDQNSLRRALKQRTPRIEVDLMNYLQNKKERRNKSSYDPSDNVGTSSEEGYAGLSRKAHYIGRYSGGSLDSDGGRKWNSQDSNLVKASLGQSASDETEEHLYQNLQTDCESSIVGSKAKVNSYTVNSMDQNFGFQTDQLGYVDSSMNFEGLSSDVDANGLRSLEHLNIAEDFEHLSELNHNHHSAEDVTVNHLTNTGLSIPQILNMICSGGDGSTISSKRTALLQLVEASVENDHSVWIQYFNQILTVVLEVLDDSDSSTRELALSLILEMLKNQKDAMENSVEVVLEKLLNVTKDIVPKVANEAEHCLTIVLSQNDPFRCLSVIIPLLVTEDEKTLVTCINCLTKIVGRLSQEELMAQLPSFLPALFEAFGNQSADIRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISHARTGKSIDAAND 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02566 1429 PANTHER PROTEIN, PUTATIVE-RELATED 28 1421 - -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 226 245 - -
Tsu01g02566 1429 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Tsu01g02566 1429 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Tsu01g02566 1429 Coils Coil 1265 1285 - -
Tsu01g02566 1429 SMART TOG_3 3 224 IPR034085 -
Tsu01g02566 1429 SMART TOG_3 278 510 IPR034085 -
Tsu01g02566 1429 SMART TOG_3 773 1016 IPR034085 -
Tsu01g02566 1429 SMART TOG_3 1182 1423 IPR034085 -
Tsu01g02566 1429 SUPERFAMILY ARM repeat 3 1400 IPR016024 -
Tsu01g02566 1429 Gene3D - 263 505 IPR011989 -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 226 261 - -
Tsu01g02566 1429 Gene3D - 1 222 IPR011989 -
Tsu01g02566 1429 Gene3D - 1210 1420 IPR011989 -
Tsu01g02566 1429 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Tsu01g02566 1429 Gene3D - 786 1010 IPR011989 -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 595 651 - -
Tsu01g02566 1429 PANTHER CLASP 28 1421 - -
Tsu01g02566 1429 Coils Coil 10 30 - -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 246 261 - -
Tsu01g02566 1429 Pfam CLASP N terminal 792 986 IPR024395 -
Tsu01g02566 1429 Pfam CLASP N terminal 281 496 IPR024395 -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 1024 1045 - -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 496 525 - -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 624 651 - -
Tsu01g02566 1429 MobiDBLite consensus disorder prediction 595 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02566 Tsu-Chr1 28456553 28470612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02566 K16578 - gmx:100801377 2357.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02566 01 28456553 28470612 Tsu01g02566 01 28456553 28470612 ECH
Tsu07g03775 07 43992309 44006592 Tsu01g02566 01 28456553 28470612 PCT