Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03743 ATGAGACGCCGCCCTTTACCGGGCATTCCCTCCAATCAGATGGAGAAATCTCCCATCAAAACCCCCAATTCACGTATCTTCTTCCTCGCTTCACTCTCTGCTTTCTTCTGGCTTTTACTCCTTTACTTCCATTTCATCATCCTCCCCCAAtcttccaccaccaccaccaccacacctCCCCGGAAGAATTTCGGTTTCCCTGATATCATAAACAAAAACCCAATTCAAATCcatcaaaaaaatttaacctTTATCACATCACTTGAAACTGATCAATGTAAAGGTAGATACATTTATGTTCATGACCTTCCTTCAAGGTTCAACCAAGACATGTTAAGAGACTGTAAAAGTTTAAGTCTTTGGACCAATATGTGTAAGTTTGTAACCAATGCAGGTCTTGGTCCGCCGCTCGAGAATGTCGACGGTGTTTTCTCTGATACTGGTTGGTATGCTACTAATCAGTTTGCAGTTGATGTTATTTTTGCTAATAGAATGAAACAATATGAATGTTTGACTAATGATTCTTCAATTGCTGCCGCTGTTTTTGTACCTTTTTATGCTGGTTTTGATATTGCTAGATATCTTTGGGGTTATAATATTTCAATGAGAGATGCTGCTTCTATTGATCTTGTTGATTGGCTTGTGAAGAGACCTGAATGGGATGTTATGAATGGTAGAGATCATTTTCTTGTTGCTGGTAGGATAACTTGGGATTTTAGGAGATTGTCTAAGGAGGAAAAGGATTGGGGGaacaagcttttgtttttaccTGCTGCTAAGAATATGTCTATGCTTGTTGTTGAATCTAGTCCTTGGAATGCTAATGATTTTGGGATTCCTTATCCTACTTATTTTCACCCTGCAAAAGATGAGGATGTTTTTGTTTGGCAGGAGAGGATGAGAAGGTTGGAGAGGAAATGGCTTTTCTCTTTTGCAGGTGCGCCGCGACCTGATAATCCGAAGTCAATTAGGGGTCAGATAATTGAGCAATGTAGGAGTTCTAAAGTTGGGAAGCTTTTGGAGTGTGATTTTGGGGAGAGTAAATGCCATTCTCCTAGTTCTATAATGCAGATGTTTCAGGGGTCGCTTTTTTGTCTTCAACCTCAGGGTGATTCTTATACAAGAAGATCTGCTTTTGATTCAATGCTAGCAGGTTGTATTCCTGTGTTTTTCCATCCGGGTTCGGCGTATACACAATATACTTGGCATCTTCCTAAGGATTATACTAAGTATTCTGTGTTCATTCCTGAGGATGATATTCGAAAGAGGAATGTTAGTATAGAGGAGAGGCTTAGTCAGATACCTGAGGAGCAAGTGAGGATTATGAGAGAGGAGGTGATTAGTCTCATTCCTAGATTAGTGTACGCTGATCCTCGCTCTAAATTAGAGACTTTGAAAGATGCTTTTGATGTTTCTGTACAAGCTGTGATTGATAAGGTTACCAATTTAAGGAAGGATATTATTGAAGGTCGCACGGACGAAAACTTCATCGAGGAGAATAGTTGGAAATATGCATTGTTGGATGAGGGACAGCGTGAGGCAGGACCTCATGAATGGGATCCTTTCTTTTCTAAACCCAAGGATGGAAATGGGGAATCCAGTGACTCCTCTGCTGAAGCTGCGAAAAATTCTTGGAAAAATGAGCAAAGAACTGAATCATGA 1662 0.3881 MRRRPLPGIPSNQMEKSPIKTPNSRIFFLASLSAFFWLLLLYFHFIILPQSSTTTTTTPPRKNFGFPDIINKNPIQIHQKNLTFITSLETDQCKGRYIYVHDLPSRFNQDMLRDCKSLSLWTNMCKFVTNAGLGPPLENVDGVFSDTGWYATNQFAVDVIFANRMKQYECLTNDSSIAAAVFVPFYAGFDIARYLWGYNISMRDAASIDLVDWLVKRPEWDVMNGRDHFLVAGRITWDFRRLSKEEKDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDEDVFVWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKDYTKYSVFIPEDDIRKRNVSIEERLSQIPEEQVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIIEGRTDENFIEENSWKYALLDEGQREAGPHEWDPFFSKPKDGNGESSDSSAEAAKNSWKNEQRTES 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03743 553 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 82 507 IPR004263 GO:0006486|GO:0016757
Tsu07g03743 553 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 52 IPR004263 GO:0006486|GO:0016757
Tsu07g03743 553 MobiDBLite consensus disorder prediction 513 553 - -
Tsu07g03743 553 Pfam Exostosin family 92 430 IPR040911 -
Tsu07g03743 553 MobiDBLite consensus disorder prediction 529 544 - -
Tsu07g03743 553 PANTHER BNAA09G10260D PROTEIN 16 52 - -
Tsu07g03743 553 PANTHER BNAA09G10260D PROTEIN 82 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03743 Tsu-Chr7 43605698 43608420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03743 K20888 - gmx:100811811 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03743 07 43605698 43608420 Tsu07g03743 07 43605698 43608420 ECH
Tsu07g03743 07 43605698 43608420 Tsu01g02613 01 29197773 29200226 PCT