Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02613 ATGAGACGCCGCCCTGTGGCGGGGGTTCTCCCTGACCAAATGGAAAAGGGAGGAGCTAAGAATCAAAATTCACGCCTTTGCTGTTTAGCATTCCTATCTGCATTCCTTTGGTTGTTTCTATTGTACTTCCATTTTGTGTTCCTTAGAGGAGATAATAGTAATGCTGCTACTATTAGCGATCAATTTGTTGATGATTCTGTTAATCATGAATCTACCGAAATCCGTGTAACCGATGTCCCTGAAGTGAAACCCCCTCCTAGAAAGATTGGGTTACCGAATCCGGTGGAGATAAAGAGTTACACCCCTCCCCCTGCGAAGAAAAATTACCCTTTTATTAAAGCATTGAAAACTGCTGAAAATATGAGTGATCCTTGTGGGGGAAGGTATATTTATGTGCATGATCTTCCCTCGAGGTTTAATGAGGATATGTTGAAGGAGTGTAAGAGTTTGAGTCTTTGGACTAATATGTGTAAGTTTACTACCAATGCTGGTCTTGGACCGCCGCTTGAGAATGTTGAAGGGGTTTTCTCGGATACTGGTTGGTATGCGACGAATCAGTTTGCTGTTGATGTGATATTTAGCAATCGGATGAAGCAGTATGAATGCTTGACTAAGGATTCATCAATTGCTGCTGCaatttttgttccattttatgCTGGGTTTGACATTGCGCGTTATCTTTGGGGTTATAATATCTCAAGGAGGGATGCCGCTTCACTTGATCTGGTTGACTGGCTTATGAAGAGGCCCGAGTGGAATATAATGAATGGGAAGGATCATTTTCTTGTTGCGGGGAGGATAACTTGGGATTTCCGGAGATTGTCTGAGGAAGAATCAGACTGGGGCAATAAGCTTCTGTTTTTACCAGCAGCGAAGAATATGTCCATGCTTGTGGTAGAGTCCAGCCCATGGAATGCAAATGATTTTGGGATTCCGTATCCTACATACTTCCACCCTGCAAAAGATGCTGATGTGTTCAATTGGCAGGACAGAATGAGGGGATTAGAGAGGAAGTGGCTTTTCTCATTTGCTGGAGCTCCACGTCCTGGTAACGCCAAATCAATCAGGGGTCAATTGATTGAGCAATGCAGAAGTTCACCGGTTGGTAAACTGTTGGAATGTGACTTTGGTGAAAGCAAATGTCATTCTCCTAGCAGCATAATGCAGATGTTTCAAAGCTCGCAGTTCTGCTTGCAACCTCAGGGTGATTCATATACACGAAGATCCGCCTTTGATTCAATGTTGGCTGGCTGTATACCCGTCTTCTTCCATCCAGGTTCGGCATACACACAATATACTTGGCATCTTCCTAAGAATTATACCAAGTATTCAGTCTTCATTCCAGAGGACGACATTCGTAAGAGGAATATGAGTATAGAAGAAATACTTGGTCAGATACCTCCTGAACAAGTGAAAATCATGAGAGAAGAGGTCATTAGTCTCATTCCAGGACTAGTATATGCTGACCCTCGCTCCAAGTTAGAAACTCTTAAAGACGCATTTGATGTTGCTGTACAGGCCGTGATTAACAAAGTTACAAATTTGAGGAAGGATATTATTGATGATCATATCGATAAAAACTTCATTGAGGAGAACAGTTGGAAATATGCTTTGTTGGATGAGGGAAAGCATGAGGTAGGAGCTCATGAATGGGATCCTTTCTTCTCAAAACCAAAAAAGGATGGTAGTGGAGAGTCCACTGATTCATCTGCTGAAGCTGCAAAAAATTCTTGGAAGAATGAGCAAAGAGGTAAATGA 1758 0.4209 MRRRPVAGVLPDQMEKGGAKNQNSRLCCLAFLSAFLWLFLLYFHFVFLRGDNSNAATISDQFVDDSVNHESTEIRVTDVPEVKPPPRKIGLPNPVEIKSYTPPPAKKNYPFIKALKTAENMSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTKDSSIAAAIFVPFYAGFDIARYLWGYNISRRDAASLDLVDWLMKRPEWNIMNGKDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFNWQDRMRGLERKWLFSFAGAPRPGNAKSIRGQLIEQCRSSPVGKLLECDFGESKCHSPSSIMQMFQSSQFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNMSIEEILGQIPPEQVKIMREEVISLIPGLVYADPRSKLETLKDAFDVAVQAVINKVTNLRKDIIDDHIDKNFIEENSWKYALLDEGKHEVGAHEWDPFFSKPKKDGSGESTDSSAEAAKNSWKNEQRGK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02613 585 Pfam Exostosin family 125 461 IPR040911 -
Tsu01g02613 585 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 539 IPR004263 GO:0006486|GO:0016757
Tsu01g02613 585 PANTHER BNAA09G10260D PROTEIN 16 539 - -
Tsu01g02613 585 MobiDBLite consensus disorder prediction 550 566 - -
Tsu01g02613 585 MobiDBLite consensus disorder prediction 550 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02613 Tsu-Chr1 29197773 29200226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02613 K20888 - gmx:100780467 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02613 01 29197773 29200226 Tsu01g02613 01 29197773 29200226 ECH
Tsu07g03743 07 43605698 43608420 Tsu01g02613 01 29197773 29200226 PCT