Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03616 ATGGAACCAATCAATTGTAGGCGTCCTGAATTGGCTCCAAGCGGCGGCACCCCTCTGCCGGAGAGTCCTCGAGTTCCTATGGAGTTTCTGTCAAGGTCATGGAGTGCCTCAGCTCTTGAAGTTACAAAAGctattacacctcaaccacCTCATTCTTCATGCATGCCTTCCATTAATAGCCAATCTTCTTCTATTCCTGAAGAAACCAGTTACCATTCTATCTCTGATGAGCTCTCAACATTGTCCAAAAATCAGTTCTCTTTTGCTTCCTCTGCTACTTCACAGCTTGTCCTTGAACGCATTATGTCACACACTGCTAGAGAGGAAGTGTCACCGTTAACGTCAGGTAGATTATCACACAGCAGCGAGCCTTTGAATGGTGGTGGTTCATTAAACGGAACAGACAGTCCACCAATTTCTCATTCAGATGAATTTGACGATGTTGTTAAGTTTTTTCGAGCAAACAACTCAATTCACCCATTATTCAATGGTGGAAGAGCAAATGGTGCTGTTGGAATTGGAAATGGTACTGCTTGTTCAGGACCTAAAACTGTTGGAAGGtggttgaaagaaagaagagaaaagaagaaagaggaaaGCAGAACACATAATGCTCAGCTGCACGCGACTATTACAGTGGCTGCTGTTGCTTCTGCTTTAGCAGCCATTGCGGCCGCAACAGCTGCCTCATCGACACCAAACAAGGATGAGAAGATGGCTAAGACAGACATGGCTGTTGCCTCGGCTGCCACATTAGTTGCTGCACAATGTGTTGAGGCTGCTGAAGCAATGGGAGCTGAACGCGACCACCTTGCTTCTGTGGTCAGCTCGGCTGTAAATGTCCGTTCACATGACGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTCCGAGGCGCAGCAACTTTGAAAGCTAGAGCTCTAAAGGAAGTATGGAATATTGCTGCTGTAACACCACTAGAGAAAGGAATGGGGGGTTTAACAGTATGTGGAAAAGCTAATAACATAAACAACATCACCAATGACAGTGGAGAAATTGTGAATGGAGATAATTTTTCAGGTTCCGGCATCCAAGAGCTACTAGCTAAGGGCAGTGAATTACTCAAACGCACTCGCAACGGCGATTTGCATTGGAAAATAGTTTCTGTTTACATACATAGGACAGGACAGGTAATGTTGAAAATGAAGAGCAAACTTGTTGCAGGAACTATTACTACCAAAAAGAACAAGAATGTTGTGCTAGACATGTGCACGGATTTACCAGCATGGCCAGGAAGAGATCTATTAAATGATGGAGAAAAACGACGCTACTTTGGATTGAAAACAGATTCGAGAGGAATCGTGGAGTTCGAGTGTAGAAATCAAAGAGAATATGATTTATGGACTCAAGGGGTCTCTAGGCTTCTCTCAATCGTTTCACAAAGACAGAACAAATGCAACAATTAA 1449 0.4265 MEPINCRRPELAPSGGTPLPESPRVPMEFLSRSWSASALEVTKAITPQPPHSSCMPSINSQSSSIPEETSYHSISDELSTLSKNQFSFASSATSQLVLERIMSHTAREEVSPLTSGRLSHSSEPLNGGGSLNGTDSPPISHSDEFDDVVKFFRANNSIHPLFNGGRANGAVGIGNGTACSGPKTVGRWLKERREKKKEESRTHNAQLHATITVAAVASALAAIAAATAASSTPNKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGMGGLTVCGKANNINNITNDSGEIVNGDNFSGSGIQELLAKGSELLKRTRNGDLHWKIVSVYIHRTGQVMLKMKSKLVAGTITTKKNKNVVLDMCTDLPAWPGRDLLNDGEKRRYFGLKTDSRGIVEFECRNQREYDLWTQGVSRLLSIVSQRQNKCNN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03616 482 MobiDBLite consensus disorder prediction 107 142 - -
Tsu07g03616 482 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g03616 482 MobiDBLite consensus disorder prediction 108 139 - -
Tsu07g03616 482 PANTHER AUXIN CANALIZATION PROTEIN 1 480 - -
Tsu07g03616 482 Pfam Auxin canalisation 20 324 IPR008546 -
Tsu07g03616 482 Pfam Plant pleckstrin homology-like region 367 473 IPR013666 -
Tsu07g03616 482 MobiDBLite consensus disorder prediction 46 71 - -
Tsu07g03616 482 PANTHER EXPRESSED PROTEIN 1 480 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03616 Tsu-Chr7 42331050 42333081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03616 - - mtr:MTR_7g095500 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03616 07 42331050 42333081 Tsu07g03616 07 42331050 42333081 ECH
Tsu07g03616 07 42331050 42333081 Tsu01g02798 01 33318780 33323885 PCT