Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03611 ATGGCTACTCTGTCCCATAGTGATTCTAATAAGAAGTATTCATGGTGGTGGGACAGTCACAATAGCCCCAAAAACTCAAAATGGCTCCAAGAAAATCTCACAGATATGGATGTCAAGGTGAAGCAAATGATCAGGCTTATCGAAGAAGACGCGGATTCCTTTGCCAGAAGGGCAGAAATGTATTACAAGAAGCGTCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATATCGAGCACTGGCTGAGAGATATGATCATGCAAATGGAGTGATACGACAGGCCCACCGTACCATGGCTGAAGCATTTCCTAATCAAATCCCACCAGTACCAGCAGATGATTTACATGCCGTTCCATCCATGGAGAATGAGCAGACGCATACGCCATATAGTACTCGCCATTTACATGCATTTTCTGACTCCGATGAATTGCAAAATGGTTTAAAACAGCTCAATGATCTCTTTATGACAGAAGAATCACCAAGTCATGTAAATTTTGGAGAAGGGCGTGCTAGAAGGGGGCTCAATTTTCTTGACACAGAGGAGACTACAGGACCAAACAACGTAAGCCATGATACTGAGAATCATGTATTATCTGATTCCGAGCGGATGACCAAAACGGAGACAGAAATTTTGGCATTAAAGATAGCCCTTGCTAGATTGGAAAGTGAAAAGGAAGATGGCTTGATTCAGTATCAGCAAAGTCTGGAGAGATTGTCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGACTTGATGACCGAGCGAGCAAAGCTGAAGCTGAAGTCCAAACCTTGAAGGAAACTCTTGCTGAATTGCATGctgaaagagaaaataatattcTTCAGTACCAGCAGTGCTTAGAGAAAATATCTAATCTGGAGAACAATATTTCTTCTGCTCAAAAGGATATAGGAGAACTTAACGAACGAGCTACCGGAGCTGAAACTGAAGCTGAGTCCTTAAAGGCAGACCTTGCTAGCTTAGATACTCAAAAGGAAGCTGTCCTTTTTCAGTACAACCAATCCTTGGAGACATTGTCAAAACTGGAGGAGAAATTAGTACAAGCCGAAGAGAACGCAAAGAGTACTAGTGAGCAAGCTAATATTGCTAAAAGTGAAATTGAGGACATGAAGTTAAAAATTgataaacttaccaaagagaATGAAGATGCGGCTCTTCGTTATCAGCAATGCTTGGAGATCATTTCTAGTTTGGAGCGTAAACTTTCTTGTGCTGAAGAGGAGGTGCGTGAGCTAAATTGCAAGATAAATGATGGGGCtgaaaagttaaatatttcTGAACAAAAGTGTCTTCTCTTGGAAACATCAAATCAGACTCTAGAATCTGAATTGCAGTCTTTGGTACAGAAGATGGGGTCTCAAAGTGAAGAACTTAGCGAGAAGCAGAAGGAATTGGGTAGACTTTGGACTAGCATACAAGAGGAGAGGTTGCGATTCATTGAGGCCGAAACTGCTTTCCAAACTCTTCAGAATTTGCATGCTCAATCTCAGGAAGAACTTAGATCTCTTGCTTCCGAGCATCATAATAAGCTTGAAATTTTGGAGACAATGGAATCACATAAGAAGGCTTTAGAGGATGAAGTACACAAGGCCAAGGaggaaaacaaaattctaaatGATCTCAAATTGTCTTCATCTGTGTCTATAAATAATTTGCAGAGTGAGATGTTAAACCTGAAGGAAACAATACAGAAACTTGAACTGGATGTTGGACTGAGAGTAGACGAAAGAAATGCTCTTCAGCAGGAAATTTACTGTCTTAAAGCGGAGCTTAATGATGTAAACAAAAGACACGAATCCACAATGGAGGAGGTCAGATCAACCGGCTTAGACCCACAATGCTTTTCCTTATCTGTGAAGTCATTGCAAGATGAAAACTCAAAGCTGAAGGAAACATGCGAGGCTGACAAAGGTGAGAACATGGCTCTCAAGAAAAAACTGGAGATCATGGAGAAGCTTCTAGAGAAAAATGCTGCATTGGAGAATTCACTTTCAGTTTTGAATGCTGAGCTGGAGAGTGTCAGAGGAAGGGTAAAGGTGTTGGAAGAAACTTGTGAATCCTTGCTTGAGGAGAAAGCAACTCTTGCTGCTGAGAAGGCAACCTTGTTTTCTCAGTTGCAAACCACAGCTGAAAAGTTGGAGAAGCTCTCAGAAAAAAACCTCCTTTTAGAAAATTCACTATTTGATGTGAATGCTGAGCTTGAAGGATTACGGGTAAAGTTAAACATTTCAGAAGAGACTTGCCTGTTGCTTGACCATGAAAAGTCTAGTCTCACCTCTGAGAAAGAAACACTAGATTCGCAATTGAACATAACTCGTCAAACACTGAAAAATCTCGAGAAACAACATAATGAATTGGAACTGCAACATTTGGAACTAAAAGTAGAAAGGGAGTCTGCACTTCAAAAGGTGGAAGATCTACTGGTTTCATTATACGCTGAGAAGGAAGATCGTTCCAGAACTGTGCAATTGAATGAAGGTCACTTGGTTGagaaggaatttcaaattcatatGCTACAAGAAGATGCAAATTACcagaaaaaggaatatgaaGAGGAACTGGACAGAGCTGTACATGCTCAAATGCAAATTTTCGTCTTGCAGAAATGTATTCGGGATATGGAGCAAAATAACCTCTCCCTTCTAGTTGAGAGTCAGAGACTCTTGGAGGCCTCCAAAACGTCGGATAGATTGATGTCGAAATTGGAGAATGACAATGTTCAAAAGCAAGTTGATGCAAAATTGTTGTCTGAGAAAATTAACATGCTAAGGATTGGGCTGCTTCGGGTGTTAAAAACTCTTGACATTAACAGCAAGCATTTGTCTGAAGATAATGTTGAAGAAGACCAGGAGCTTCTGAACCATATACATGACAAACTTCAAGAAACACAGAATTCTTTTGTCACAGTTTCTCATGAAAACCAGCAAGCAGCCATTGAGAATTCAGTTCTTGTTTCATTCCTTGACCAGTTGAAATTAAAGGCTGAAAATCTTGTAACAGAAAGAGAAGCACTTGAAGGGGAGTTGAGGACAATGTCTAAGCAATACTTGGCACTGCAAGAAGAGGTCCGTATGATGGCAGAGAAGAATCAAGAATTGAAGTTGACAATAAGCAAGGGAGAAGAGAAAATGGAAGCAATGACAACTGAAAAATTGACGGCACTGAAAGAGGTAAGCAAAGAAATGGATAAACTTGTTTCAGTAAATGTCGACCTTGAAGAGAGATTGAAAATTGTGATGGGAAAATTAGAAGATGTGCAGATTGAAAACTCATATCTTAAGGAGTCATTTGTAGTGTCTAACACTGAACAAAAATTAGTTGAATCTGTCAATGATCAATTAAATAGTCAGATTAGGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATCTTGGGAGCAGCAGAGATGTATAGTGCTTTACAGGATGAGAAAAAAACATTGCAAAAATTGGTGGAAGATTTGAAGAGTAAGTATGAAGAGGCGAGGGTGATACTTGAAGACCGAGCTAGTCAAATTTTAGAATTATCATCAATCAATGATCATCAAAATGAAGAGCTTGAATGCCTTCATGAAGTGAATAAGAAGTTGAAGGAAGAAATGAGGCACCTGCATGAAGAACTTGGAGAAACTAAACTGAGGGAGAAAAAGCTAAGTTGTGCATTACTCAAGGGAGCGGATGAGCTTGAACAATGGGAATCCCAGGCTGCCACATTCTATACCGCAATGCAGATTACTACTGTCAATGAGACATTCTTTGAAGGAAAGGTCCGTGAGCTAGCTGATGCATGTGAGAATCTTGAATGTATAAACAGCTCCAAAGTTATGGAAAGTGAAAAGCTGGAAGAAAGAGTTGACAAGTTGGAAGCTGAAAACAGGAGATTACAGAGTCAGTTGACTTCTTATGTCCCAGCAGTCAGTGTTTTGAATGATTGTATTACATCCTTGGAGATGCAGACGCTTGTTCATGCAAAACCTCATAGTCACGACTACAAAGAATCGAAGATTAAAAATTTGGCAAATGTCAAATATGCTGATGGTGATCCACGAAAAAGTGAAGATCAAAATGCTACAGAAACAGATGCACTTCCAGACTTCCAAGACATGCAGAAAAGGGTTAATGCAATTGAAATGGCTGTTAAACAGATGAATGAAAATTTCAAACCTAAGGATGAAATGAGAGAGATTCAAGTATTGAAATCTGGAATCAGCTGGCGCCAAGGAAACGCTCAAACAAGCAAACATTATACTCAAATGGATGAAGCAAAGGAGCGTCAATTTGGAGCTGTTTATGGACATAGGACAGGAAAATCATTGCAAGATGTTCCTGTAGCGGAAATTGAAGTTTTGCCAAAAGACATTGTGCTTGATCATACATATGGGAGAAGTAGGAGAGGAGCTCGTGGATCCGATGATCAGATGCTTGAATTGTGGGAAACTGCTGATAAGGATGGCGTTATTGGCCTGAGAGTTGGCAAGGCACAGAAGGACACTGCACCTACTGGATATCACCAAAGGAGACATAGCAAggattccaaaaataaatatccTTCGGTAGATTCCTTGATCGAAAAGGAATTGAGTGTGGACAAATTAGAGATCTCAAGAAGACAGTCACAAGACTCACAACCGCTGCTGAATGAAGGCAATAAGAGGAAGGTTTTAGAAAGACTTGATTCAGATGCTCAAAAATTGATGAACCTCGAAATCACCGTACAAGATTTGATAAACAAGATGGAAATTATTGAGAAGAACACAATGGGAAAAGGTAGTGAGTATGATGCTGTGAAAGGGCAGCTTGAATCTGCTCAGGAGGCCATCACAAAGTTGTTTGATGCCAACCGCAAGTTGATGACGAATGTAGAAGAGGGTACACCATCCTTTTCTGGGACGTCTGTAACAATGTCAGATGAGAGTGGAAGTGTCGGCAGAAGGAAAGTTTCAGAACAGGCTCGGAGAGGATCTGAAAAAATAGGACGGCTGCAGTTGGAGGTACAAAGGCTGCAATTTTTACTTCTAAAATTGAATGATGACAAAGACGGAAAAGGAAAAGCAAAAgcaatgattgatgatgaaaatCCAAGAGTCCTTTTGCGAGATTATCTCTATGGTGAGACAAAGAAAAGCTaccacaagaagaagaagaaaacatcCTTTTGTGCATGCGTGCAGCCGCCCACTAAGGGAGATTGA 5235 0.3916 MATLSHSDSNKKYSWWWDSHNSPKNSKWLQENLTDMDVKVKQMIRLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHANGVIRQAHRTMAEAFPNQIPPVPADDLHAVPSMENEQTHTPYSTRHLHAFSDSDELQNGLKQLNDLFMTEESPSHVNFGEGRARRGLNFLDTEETTGPNNVSHDTENHVLSDSERMTKTETEILALKIALARLESEKEDGLIQYQQSLERLSNLESEMSRARENSQGLDDRASKAEAEVQTLKETLAELHAERENNILQYQQCLEKISNLENNISSAQKDIGELNERATGAETEAESLKADLASLDTQKEAVLFQYNQSLETLSKLEEKLVQAEENAKSTSEQANIAKSEIEDMKLKIDKLTKENEDAALRYQQCLEIISSLERKLSCAEEEVRELNCKINDGAEKLNISEQKCLLLETSNQTLESELQSLVQKMGSQSEELSEKQKELGRLWTSIQEERLRFIEAETAFQTLQNLHAQSQEELRSLASEHHNKLEILETMESHKKALEDEVHKAKEENKILNDLKLSSSVSINNLQSEMLNLKETIQKLELDVGLRVDERNALQQEIYCLKAELNDVNKRHESTMEEVRSTGLDPQCFSLSVKSLQDENSKLKETCEADKGENMALKKKLEIMEKLLEKNAALENSLSVLNAELESVRGRVKVLEETCESLLEEKATLAAEKATLFSQLQTTAEKLEKLSEKNLLLENSLFDVNAELEGLRVKLNISEETCLLLDHEKSSLTSEKETLDSQLNITRQTLKNLEKQHNELELQHLELKVERESALQKVEDLLVSLYAEKEDRSRTVQLNEGHLVEKEFQIHMLQEDANYQKKEYEEELDRAVHAQMQIFVLQKCIRDMEQNNLSLLVESQRLLEASKTSDRLMSKLENDNVQKQVDAKLLSEKINMLRIGLLRVLKTLDINSKHLSEDNVEEDQELLNHIHDKLQETQNSFVTVSHENQQAAIENSVLVSFLDQLKLKAENLVTEREALEGELRTMSKQYLALQEEVRMMAEKNQELKLTISKGEEKMEAMTTEKLTALKEVSKEMDKLVSVNVDLEERLKIVMGKLEDVQIENSYLKESFVVSNTEQKLVESVNDQLNSQIRNGKELLSQKENEILGAAEMYSALQDEKKTLQKLVEDLKSKYEEARVILEDRASQILELSSINDHQNEELECLHEVNKKLKEEMRHLHEELGETKLREKKLSCALLKGADELEQWESQAATFYTAMQITTVNETFFEGKVRELADACENLECINSSKVMESEKLEERVDKLEAENRRLQSQLTSYVPAVSVLNDCITSLEMQTLVHAKPHSHDYKESKIKNLANVKYADGDPRKSEDQNATETDALPDFQDMQKRVNAIEMAVKQMNENFKPKDEMREIQVLKSGISWRQGNAQTSKHYTQMDEAKERQFGAVYGHRTGKSLQDVPVAEIEVLPKDIVLDHTYGRSRRGARGSDDQMLELWETADKDGVIGLRVGKAQKDTAPTGYHQRRHSKDSKNKYPSVDSLIEKELSVDKLEISRRQSQDSQPLLNEGNKRKVLERLDSDAQKLMNLEITVQDLINKMEIIEKNTMGKGSEYDAVKGQLESAQEAITKLFDANRKLMTNVEEGTPSFSGTSVTMSDESGSVGRRKVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDDKDGKGKAKAMIDDENPRVLLRDYLYGETKKSYHKKKKKTSFCACVQPPTKGD 1744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03611 1744 Coils Coil 590 621 - -
Tsu07g03611 1744 MobiDBLite consensus disorder prediction 1636 1667 - -
Tsu07g03611 1744 Coils Coil 1068 1102 - -
Tsu07g03611 1744 MobiDBLite consensus disorder prediction 1514 1534 - -
Tsu07g03611 1744 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Tsu07g03611 1744 Coils Coil 1285 1312 - -
Tsu07g03611 1744 Coils Coil 562 582 - -
Tsu07g03611 1744 Coils Coil 912 932 - -
Tsu07g03611 1744 Coils Coil 719 739 - -
Tsu07g03611 1744 PANTHER PROTEIN NETWORKED 4A 1063 1744 - -
Tsu07g03611 1744 PANTHER PROTEIN NETWORKED 4A 1 1063 - -
Tsu07g03611 1744 Coils Coil 345 435 - -
Tsu07g03611 1744 Coils Coil 1001 1063 - -
Tsu07g03611 1744 Gene3D - 204 375 - -
Tsu07g03611 1744 Coils Coil 853 873 - -
Tsu07g03611 1744 Coils Coil 775 816 - -
Tsu07g03611 1744 Coils Coil 527 554 - -
Tsu07g03611 1744 Coils Coil 632 652 - -
Tsu07g03611 1744 Coils Coil 1380 1400 - -
Tsu07g03611 1744 Coils Coil 1124 1179 - -
Tsu07g03611 1744 Coils Coil 450 477 - -
Tsu07g03611 1744 MobiDBLite consensus disorder prediction 1636 1655 - -
Tsu07g03611 1744 Coils Coil 1579 1599 - -
Tsu07g03611 1744 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Tsu07g03611 1744 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1063 1744 - -
Tsu07g03611 1744 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1063 - -
Tsu07g03611 1744 Coils Coil 656 711 - -
Tsu07g03611 1744 Coils Coil 233 281 - -
Tsu07g03611 1744 Coils Coil 205 225 - -
Tsu07g03611 1744 Coils Coil 289 337 - -
Tsu07g03611 1744 MobiDBLite consensus disorder prediction 1504 1534 - -
Tsu07g03611 1744 Coils Coil 499 519 - -
Tsu07g03611 1744 Coils Coil 1194 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03611 Tsu-Chr7 42268094 42275357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03611 - - mtr:MTR_7g095410 2714.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03611 07 42268094 42275357 Tsu07g03611 07 42268094 42275357 ECH
Tsu07g03611 07 42268094 42275357 Tsu01g02809 01 33512429 33520232 PCT