Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02809 ATGGCGAATCGGTCTCACACAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCTAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTACTATAAAAAACGCCCGGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGAGCATTGGCTGAGAGATATGATCATGCCACTGGAGTTATCCGTCATGCCCATCGGACCATGTCTGAAGCATTTCCTAATCAAAATCCTATGATGATCACAGATGATTTTTCTGCAGTTCCGCCCATGGAGACTGAGCCACGCACTCCAGAAACACACCACCCTTCGCGTGCATTTCTTGACTCGGATGAATCAGAAAAGGATGCTCATGTTATCAAAAGAAATGGAGCGCATAGTGAAGAACCTAGTTCTACTTTGAATAAGACAGGTTTACGACAGCTCAACGATCTCTTCATCCCTGGAGAGCATGCAAAGTTTGCAGAAGGGCATGCTAGAAGGGGGCTCAATTTTTTAGAGACACAGGAGAGTAGTGAGCAAAACAATGGAAGCCATGTCAGTAAGGGTCAAGTCTTGTCTGAGTCCGAACGCGTGAAAAAAGCTGAAGCAGAAATTTTGGCCTTGAAACAAGCCCTTGCCAAATCAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAGCAGAGTGTGGAGAAGTTGTCTAATCTTGAATCAGAAGTATCTTCAGCACAAGAGAATTCTCAAAGACTCGATGAACGAGCAGGCAAAGCAGAAGCCGAAGTTCAAGATTTGAAGGAAGCAGTAATCAAATTACAGGTTGAAAGGGAAGCTAATCTTCTTCAGTACCAGGAGTGCTTGGAGAAAATAACCGAGCTGGAGAAAAATATTTCTTCTGCTCAGAAGGATGCAGGAGAATTTAATGAACGTGCTACTAGAGCTGAAACTGAAGTTGAGTCGTTGAAGCAGGACCTTGCTCGAGTAGAAGCTGAAAAGGAAGCTGCCCTTTTTGAATATAAACAGTGCTTGGAGACATTATCGAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAACGCTAGAAGGATTAATGAGCAAGCTAATATAGTTGAAAATGAAATCAATGTTTTGAAGCTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGTTGCTCTTCGGTATCAGAAATGCTTGGAGATAATTTCCAGTTTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGAAGAAGAGGCTGAAAAGTTACATAGTTCTCAGGAGAAGTGTGTTCTTTTGGAAACATCAAATCACGCTCTACAGTCTGACTTACAGTCTTTGGTACAAAAGATGGGGTCTCAAAGTGAAGAACTTGATGAGAAGCAGAAAGAATTGGGTAAACTTTGGAGTTGCATGCAAGAGGAGAGACTGCGATTCATTGAGGCTGAAATCGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTTCTGACTTTCACAGTAAAGTGGAAATACTCGGGAATGTGGAATCACGTAAGCAGGCTCTAGAGGATGAAGTGCACAGAGTGAATGaggaaaacaaaattctaaatGAGCTCAAAATTTCTTCATCTCTATCCATAAAAAGTTTGCAGGATGAgatattgaatttgaaagagACAATAGTCAAACTTGAACAAGAGGTTGAGCTGCGACTTAATGAAAGAAACGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAACTTAATGATATGAATAAAAAACACAATGCTGTAATGGAGGAGGTCAGGTCAGCTGACTTAGATCCTCAGTGCTTTGGCACAACTGTGAAAAATTTGCAAGAAGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGACAAAGATGAGAAAGCAGCTCTTTtggtaaaattggaaatcaTGGAGAAACTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAATTAAATAGCGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCAGTCGCTGCTTGTGGAGAAATCAGCTCTTGCTGCCGAGAAGGCCACCTTGTTTTCTCAATTACAAGCCACAACTGAAAAGCTGGAGAAGCTCACAGAAAATAACAACCTTTTGGAAAACTCACTCTTTGATGTCAACGCTGAACTTGATGGATTAAGAGGAAAGTCCAAGATCTTAGAAGACACATGCCAGTTACTTGAACATGAGAAGTCCGATATCTTTTCGGAGAAAGAAGCCTTATTTTCACAGTTGAACACAACACACCAAAAGCTGAAAGATCTTGAAAAACAACACAGTGAATTAGAATTAATGCATTTAGAACTAAAAGGAGAAAGGGAGTCTTCACTTAAAAAGGTGGAAGAGCTATTGGTTTCCCTATATTCCCAAAGGGAAGAACATTGCAGAGTTGTGAAGTTGAATGAAGATGAACTGGCGAACAAGGAATTCCAAATTCATACTATGCAAGAAGATGCAAAGTGCCGGAAAGAAGAATACAATGAGGAACTGGATAGAGCTATACATTCTCACATTGAAATTTTCATCTTGCAGAAGTTTATCCAAGATTTGGAGAAAAAGAACTTTTCCCTTTTATTCGAGTGCCAGAGTCTTTTGGAAGCGTCCAAAACGTCTGACAGAATAATTTCTAAACTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCtgagaaaattaaaatactaaggATTGGATTGCTTCAGGTGTTGAAGACTCTTGACATTAACGGCAAGGATTTCTTTGAAGATATGCTTGATGAAGACCAAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGACAAAAGTCTTTCGACACAATTTTCAACGAAAGCCATCACATGGCCGTTGAGAATTCAGTTCTGATTATATTTATTGAGCAGTTGAAACTAAAGGTAGAGAATCTTGTGACAGAAAAAGGTGCGCTTCACGAGGAGTCCAGGATACAGTCAGAGCAGTTCAAGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAATAATCAGGAGTTTAAGTTCACAATAAGCAAAGGAGAAGAGAGAATGGAAGGAATGACATCTGAAATAGAGAATCTACGCAAAGAGCTATCAGACTTTGAAAATAGCCACCGAAGCTTAAAGGAAGAAAGCTGCACGATACTTGAAGAGAAAAACTCCTTGATGGGAAGATTTAAAGATCTGGGTGAGGAGAAGGGTAACTTGGAAGAAGAAATTTGTGTCCTGTTCCATGAGAGATTAGTTCAATCTAATATATCTGTGGTTTACCAGAATATTATCTTTGAAAAACTTCAGGAACTTAACCAGCTTGGTCAAGAACTTGATAAGCTCTATTCAGAAAATAATAACCTTGAGGCGAGTTTGAAAACAATGGCACACAAATTAGAAAATGCAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCAATTGACTTGTCAGATTAGTAATGAAAGGGAAAGGTTGAGTCAAAAGGAAAAAGTGCTTTTAGAAACAGCCAAGACGTTTCATGCTTTACACACTGAGAAAAATGAATTGCAAAGAACGGCAGATGATCTGAAGGTTAGATATGAGGATGCCAAGGGGAAACTTGAAGAGCAAGctaatcaaattttcaaattgtCGTCAGACAAGGATCATCAAAATGAAGAGCTTGGATGCCTTTACGAAGCGAACCAGAAATTGGAGTCTGAAATGAAGTTTCTATACCAAGAACTTGAAGAAACTAAACTGAAGGAAAAGAAGCTGAGTTATGAAGTGCATGAAGGGATAAATGAGATTGAACAATGGGAAACTCAGGCTGCAGCACTCTATGGTGAACTGCAGATTTCGGTTGTCAATGAAACACTATTTGAAGGGAAGACCAGTGAGCTAGCTGATACATGCATGCATCTTGAGCACATAAACAACTCGAAAGACACGGAAAGTGAACAGCTGAAAGAATTAGTTAGCAAGTTGCAAGGTGAAAACGGGAGACTCTATGATCaattatctgcttatgtcccaGCTATCGGTGCTTTGAATGATTGTGTAACATCTCTGGAGACGAAGACTCTTGGACATGCAAAGCATCATAACTATGAAAAACCGGAGGTTAAAAATTTGGTGAATCACCACCAATACACTGAAAATGGTCAACATACAGATGAAGATCAGAATGTTACGGCACCGGATCCACTCCTTGAATTTCAAGACCTGCAGAGGAGGATCAATGAAATTTCAGTGGCAGTTAAAAATTTAAACGGAAGTTTCAAACCAGAGGATGAAATGAGAGAGATTCAAGAAGCAAAGAAGAATGAACAGAAGATGGGGAAGTCAAGGCCAGATAATCCTGTAAGTGAGATTGAAGTACTGCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCCTCATATGGAGTAAGTAGGGGAGGGGCTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACATCTGATAAGACACAGAAGATGGCGGCAGAACCAGTAGAAAATCATCGTCAAAGAGGAACAGCCAAGGAAACCTACAACAAACATCCTTCAGGAGATTACTTGGTAGAAAGGGAATTGAGTGTGGATAAGTTAGAGATCTCGAGAAGATTGTCAAGGCCGCGTGAAGAAGGCAACAAGAGCAAGCTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACAAACCTTCAAATAACCGTACAAGATTTGATGAAGAAAGTGGAAAGTACTGAGAAGAGCACAAAGGGGAAAGGTTCTGAGTATGAAACGGTTAAAGGGCAGGTTGAAGCTGCTCAGGAGACCGTCACAAAGTTGTTTGATGTGAACCGCAAGTTGATGAAGAATGTTGAAGAAGGTACATTGTCTTCATCTGGGACGGCTGAATCAACGTCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCAGAACAGGCGCAGAGAGGATCTGAAAAAATAGGACAACTTCAGTTGGAGGTGCAAAGACTGCAGTTTCTTCTTTTGAAACTCAATGAAAGCAAAGATAAAACAAGAATGGATGATCGAAGTCCGAGAGTACGTCTGCGGGATTATCTCTATGGCGCGACAAGAACCAACcaccaaaagaagaagaaatcaccTTTTTGTGCATGTGTAAGACCACCCACTAAGGGAGATTGA 5379 0.3913 MANRSHTDSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQNPMMITDDFSAVPPMETEPRTPETHHPSRAFLDSDESEKDAHVIKRNGAHSEEPSSTLNKTGLRQLNDLFIPGEHAKFAEGHARRGLNFLETQESSEQNNGSHVSKGQVLSESERVKKAEAEILALKQALAKSEDEKEAGLLQYQQSVEKLSNLESEVSSAQENSQRLDERAGKAEAEVQDLKEAVIKLQVEREANLLQYQECLEKITELEKNISSAQKDAGEFNERATRAETEVESLKQDLARVEAEKEAALFEYKQCLETLSKLEERLKESEENARRINEQANIVENEINVLKLEVTKLNEEKEDVALRYQKCLEIISSLEHKLSCAEEEVRRLNSKIEEEAEKLHSSQEKCVLLETSNHALQSDLQSLVQKMGSQSEELDEKQKELGKLWSCMQEERLRFIEAEIAFQTLQHLHSQSQEELRSLASDFHSKVEILGNVESRKQALEDEVHRVNEENKILNELKISSSLSIKSLQDEILNLKETIVKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHNAVMEEVRSADLDPQCFGTTVKNLQEENSKLKETCEADKDEKAALLVKLEIMEKLLEKNSVLENSISDLNAELNSVRGKVNVLEETCQSLLVEKSALAAEKATLFSQLQATTEKLEKLTENNNLLENSLFDVNAELDGLRGKSKILEDTCQLLEHEKSDIFSEKEALFSQLNTTHQKLKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVVKLNEDELANKEFQIHTMQEDAKCRKEEYNEELDRAIHSHIEIFILQKFIQDLEKKNFSLLFECQSLLEASKTSDRIISKLETENIQKQDDVDSLSEKIKILRIGLLQVLKTLDINGKDFFEDMLDEDQTLLNHIHGKLKERQKSFDTIFNESHHMAVENSVLIIFIEQLKLKVENLVTEKGALHEESRIQSEQFKALQIEFQKVLENNQEFKFTISKGEERMEGMTSEIENLRKELSDFENSHRSLKEESCTILEEKNSLMGRFKDLGEEKGNLEEEICVLFHERLVQSNISVVYQNIIFEKLQELNQLGQELDKLYSENNNLEASLKTMAHKLENAEMENSHLKELFVKSNVELNLVESVNDQLTCQISNERERLSQKEKVLLETAKTFHALHTEKNELQRTADDLKVRYEDAKGKLEEQANQIFKLSSDKDHQNEELGCLYEANQKLESEMKFLYQELEETKLKEKKLSYEVHEGINEIEQWETQAAALYGELQISVVNETLFEGKTSELADTCMHLEHINNSKDTESEQLKELVSKLQGENGRLYDQLSAYVPAIGALNDCVTSLETKTLGHAKHHNYEKPEVKNLVNHHQYTENGQHTDEDQNVTAPDPLLEFQDLQRRINEISVAVKNLNGSFKPEDEMREIQEAKKNEQKMGKSRPDNPVSEIEVLPKDIMLDQISECSSYGVSRGGALESDDHMLELWETSDKTQKMAAEPVENHRQRGTAKETYNKHPSGDYLVERELSVDKLEISRRLSRPREEGNKSKLLERLDSDAQKLTNLQITVQDLMKKVESTEKSTKGKGSEYETVKGQVEAAQETVTKLFDVNRKLMKNVEEGTLSSSGTAESTSDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNESKDKTRMDDRSPRVRLRDYLYGATRTNHQKKKKSPFCACVRPPTKGD 1792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02809 1792 Gene3D - 675 856 - -
Tsu01g02809 1792 Coils Coil 251 299 - -
Tsu01g02809 1792 Coils Coil 1019 1039 - -
Tsu01g02809 1792 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Tsu01g02809 1792 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1792 - -
Tsu01g02809 1792 Coils Coil 1068 1102 - -
Tsu01g02809 1792 Coils Coil 1110 1130 - -
Tsu01g02809 1792 Coils Coil 730 764 - -
Tsu01g02809 1792 Coils Coil 580 639 - -
Tsu01g02809 1792 Coils Coil 545 572 - -
Tsu01g02809 1792 Coils Coil 1159 1200 - -
Tsu01g02809 1792 Coils Coil 1250 1277 - -
Tsu01g02809 1792 SUPERFAMILY Tropomyosin 390 636 - -
Tsu01g02809 1792 Coils Coil 1633 1653 - -
Tsu01g02809 1792 Coils Coil 216 243 - -
Tsu01g02809 1792 Coils Coil 650 670 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 199 219 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 1569 1588 - -
Tsu01g02809 1792 Coils Coil 930 950 - -
Tsu01g02809 1792 Coils Coil 307 460 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 199 216 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 126 156 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 1692 1724 - -
Tsu01g02809 1792 Coils Coil 871 891 - -
Tsu01g02809 1792 Coils Coil 681 715 - -
Tsu01g02809 1792 SUPERFAMILY Tropomyosin 215 414 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 1692 1706 - -
Tsu01g02809 1792 Coils Coil 793 827 - -
Tsu01g02809 1792 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Tsu01g02809 1792 PANTHER PROTEIN NETWORKED 4A 1 1792 - -
Tsu01g02809 1792 Coils Coil 1285 1319 - -
Tsu01g02809 1792 MobiDBLite consensus disorder prediction 119 166 - -
Tsu01g02809 1792 Coils Coil 475 495 - -
Tsu01g02809 1792 Coils Coil 1215 1235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02809 Tsu-Chr1 33512429 33520232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02809 - - gmx:100810726 2251.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02809 01 33512429 33520232 Tsu01g02809 01 33512429 33520232 ECH
Tsu07g03611 07 42268094 42275357 Tsu01g02809 01 33512429 33520232 PCT