Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03601 ATGGCACAAAGAAACATTGAGATGTTGCTAAGCATGTTCTTTGTTGTAGTGACTCTTTGTGGTGTCACAGTGGCACAAATTGACTCAAGTTGTTCCAATGTGCTCATAAGTCTTTCTCCATGCCTTGACTACATCACAGGACTGACCTCCACCCCTTCCTCTGGTTGCTGCTCACAACTTGCATCGGTGATGGGGTCACAGCCGCAGTGTCTATGTGAGGTTGTTAACGGTGGTGCTTCGTCTATTGCTGCTAGTCTCAACATCAATCAGACTCGTGCTTTGACACTTCCCACTGCTTGCAATGTCCAAACACCTCTTATCAACACTTGCAGTGCTTCTTCTACTCCTCCGGCAGGTGTTTCTATTTCCAACATTCCAAATTCTCCTTCAGGGATTTTTTCATCAACTACAGCCGGTGGTGGAACTATCCATGGCTCATCCTCATCTTATGCAACATCAAGTTCCGCAAAATTACAATGTTCTTTGCTTGTTCTGGTTATCTTTGCAAACTTAACATTCACTTTCATCAGTTTCATGACCACGACTTAG 549 0.4426 MAQRNIEMLLSMFFVVVTLCGVTVAQIDSSCSNVLISLSPCLDYITGLTSTPSSGCCSQLASVMGSQPQCLCEVVNGGASSIAASLNINQTRALTLPTACNVQTPLINTCSASSTPPAGVSISNIPNSPSGIFSSTTAGGGTIHGSSSSYATSSSAKLQCSLLVLVIFANLTFTFISFMTTT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03601 182 Gene3D - 28 107 IPR036312 -
Tsu07g03601 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 5 177 IPR043325 -
Tsu07g03601 182 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Tsu07g03601 182 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Tsu07g03601 182 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Tsu07g03601 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 111 IPR036312 -
Tsu07g03601 182 Pfam Probable lipid transfer 22 110 IPR016140 -
Tsu07g03601 182 SMART aai_6 31 110 IPR016140 -
Tsu07g03601 182 CDD AAI_LTSS 38 102 - -
Tsu07g03601 182 PANTHER LIPID TRANSFER PROTEIN 5 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03601 Tsu-Chr7 42182148 42183113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03601 5 176 Lipid Metabolism Gene Families AT3G22600 36.000 8.16e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03601 - - cam:101512493 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03601 07 42182148 42183113 Tsu07g03601 07 42182148 42183113 ECH
Tsu01g02827 01 33823830 33824752 Tsu07g03601 07 42182148 42183113 PCT