Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03578 ATGGAGCTTAGCAAAGTAACGTTAGAAATATTCACAAAACTCGAACAACAATGGCTTTCACTCTCACACTGTAAAGCCACTTCCAAAACTCGGATTCTCAGCATTGACGGCGGAGGAACCACCACCATTGTCTCCGGTGCTGCCTTAATCCACCTTGAGGACCAGATCCGATCACAAACCAACAATCCTCACGCTCAAATCACCGATTACTTCGACATCATAACCGGAACCGGCATTGGCGCAATACTCGCTGCTATGATCACCGCTGATGACGGATTTGGTAGACCTCTTTACACAGCTAGAGATGCTGTTAGCTTCATCACCGAAAGGAATCACGatttttacaaagaaaaaaccGTCGGAGTTTTTCGCCGGCGTCGGAGATTCTCATCTGCCAGCATTGAGAATTTGTTGAAGCGAGtttttcaaagaaaagaaaacgaAGAAAAATCGTTAACATTAAAGGACACGTGTAAGCCTCTGCTTATTCCTTGCTTCGATCTAAAAAGCTCTGCGCCGTTCGTTTTCTCACGAGCCGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGTTATGGAAAGTCTGTCGTGCCACGTCATCAACTCCGAGTCTATTTAAACCGTTTCAATTCTCATCCGTCGACGGAAAAACCTCTTGCTCAGCCGTGGACGGTGGTCTTGTGATGAACAATCCAGCGGCTGCTGCCGTCACGCATGTTCTCCATAACAAACGCGATTTCCCGTCGGTGAATAGTGTGGAAGATCTGATGGTTCTGTCAATCGGAAACGGAGCTCCGGCGAACAGAGTTCGTCGTGATGTTCGTGAATGTTCGACGTCGACGGTTGTTGACATTGCTCTCGACGGCGTATCGGAAACCGTTGATCAGATGTTAGGAAACGCTTTCAGTTGGAACCGTACTGACTACGCCAGAATTCAGgcgTTTGGTTTAGGTGAAAAGGGAAGTTGGGAAGAAACGGAGGTGTTAAATGAGAGAGTGTTGGAGTCGTTACCGTTTGGTGGGAAACGGTTACTACAAGAAACTAACGGTAACAGAATTGAGAGGTTTGTGCAACGTCTTGTTGCTACTGGAAAGTCTAGTTTACCACCTAGTCCTTGTAAGGTTACGCCGTTAGTTTAG 1137 0.4573 MELSKVTLEIFTKLEQQWLSLSHCKATSKTRILSIDGGGTTTIVSGAALIHLEDQIRSQTNNPHAQITDYFDIITGTGIGAILAAMITADDGFGRPLYTARDAVSFITERNHDFYKEKTVGVFRRRRRFSSASIENLLKRVFQRKENEEKSLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSSTPSLFKPFQFSSVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNSVEDLMVLSIGNGAPANRVRRDVRECSTSTVVDIALDGVSETVDQMLGNAFSWNRTDYARIQAFGLGEKGSWEETEVLNERVLESLPFGGKRLLQETNGNRIERFVQRLVATGKSSLPPSPCKVTPLV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03578 378 Gene3D Cytosolic phospholipase A2 catalytic domain 20 367 - -
Tsu07g03578 378 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Tsu07g03578 378 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Tsu07g03578 378 PANTHER PATATIN-LIKE PROTEIN 6 2 376 - -
Tsu07g03578 378 PANTHER PATATIN 2 376 - -
Tsu07g03578 378 CDD Pat17_PNPLA8_PNPLA9_like 32 336 - -
Tsu07g03578 378 SUPERFAMILY FabD/lysophospholipase-like 29 316 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03578 Tsu-Chr7 41957654 41959165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03578 1 377 Acyl Lipid Metabolism Gene Families AT3G63200 67.617 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03578 - - gmx:100806989 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03578 07 41957654 41959165 Tsu07g03578 07 41957654 41959165 ECH
Tsu07g03578 07 41957654 41959165 Tsu01g02854 01 34299350 34300858 PCT