Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03554 ATGGGTGCTTCACATTCCATCTCTGAAAATTCAATCTATGAATTCACAGTTAAGGATGCAAAGGGAAAAGATGTGAACCTTAGCAGTTACAAGGGAAAAGTTCTTATTGTAGTTAATGTTGCTTCAAAATGTGGATTTACCAATGTCAATTATACCCAGTTAACTGAGCTTTACAACAAATACAAGGATAAAGGACTTGAGATATTGGCTTTTCCATGCAATCAGTTTTTGAATCAAGAGCCTGGGAGTAGCCATGATGCAGAGCAATTTGCATGTACAAGATTCAAAGCTGAGTATCCAATTTTTGGAAAGATACGTGTGAATGGATCCGAAACCACACCTCTCTTCAGATTCCTTAAAGATAAGAAATCTGGTTTTCTGGGATCTAGGATAAAGTGGAATTTCACCAAGTTTTTGATTGGCAGGGAAGGGCAGGTGCTCCAGCGTTATGGCCCAACCACCTCACCATTTTCCTTTGAAAATGACATCAAGAAGGCCTTGGGAGAGGCTTGA 513 0.3957 MGASHSISENSIYEFTVKDAKGKDVNLSSYKGKVLIVVNVASKCGFTNVNYTQLTELYNKYKDKGLEILAFPCNQFLNQEPGSSHDAEQFACTRFKAEYPIFGKIRVNGSETTPLFRFLKDKKSGFLGSRIKWNFTKFLIGREGQVLQRYGPTTSPFSFENDIKKALGEA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03554 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Tsu07g03554 170 PANTHER GLUTATHIONE PEROXIDASE 5-RELATED 1 168 - -
Tsu07g03554 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Tsu07g03554 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Tsu07g03554 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 Gene3D Glutaredoxin 3 169 - -
Tsu07g03554 170 PANTHER GLUTATHIONE PEROXIDASE 1 168 IPR000889 GO:0004602|GO:0006979
Tsu07g03554 170 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03554 Tsu-Chr7 41669130 41673333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03554 - K00432 ahf:112805343 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03554 07 41669130 41673333 Tsu07g03554 07 41669130 41673333 ECH
Tsu07g03554 07 41669130 41673333 Tsu01g02884 01 34765273 34768486 PCT