Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02884 ATGGGTGCTTCACAATCAGTCTCAGAAAATTCTATTCATGAATTCAAAGTCAAGGATGCAAGGGGCAAAGATGTGGACCTCGGCAAGTACAGGGGGAAAGTTCTTCTTGTAGTTAATGTTGCTTCAAAATGtaacTTTGCAGATGCTAATTACACTCAGCTAACTCAGCTTTACACCAAATACAAGGAGATAGGTTTTGAGATATTGGGATTTCCATGCAACCAATTTTTGAGGAAAGAGCCAGGGACTAGTCAAGAGGCACAAGATTTTGCCTGTGACAAATATAAGGCTGAGTATCCTATTCTTGGAAAGataCGTGTGAATGGAAAAGATACAGCACCTGTCTATAAATACCTGAAAGCACAAAAATGTGGAAGTTTGGGATCAAGAAGAATAAAGTGGAATTTCACTAAGTTTTTAGTTGATGAGAAAGGCCATGTCATCCAGCGTTATAGTCCAACCACCCAACCATTGGCCATTGAGGATGATATCAAGAAGGCATTGAGAGTGGCTTGA 516 0.3973 MGASQSVSENSIHEFKVKDARGKDVDLGKYRGKVLLVVNVASKCNFADANYTQLTQLYTKYKEIGFEILGFPCNQFLRKEPGTSQEAQDFACDKYKAEYPILGKIRVNGKDTAPVYKYLKAQKCGSLGSRRIKWNFTKFLVDEKGHVIQRYSPTTQPLAIEDDIKKALRVA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02884 171 PANTHER GLUTATHIONE PEROXIDASE 1 171 - -
Tsu01g02884 171 PANTHER GLUTATHIONE PEROXIDASE 1 171 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Tsu01g02884 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 Gene3D Glutaredoxin 2 171 - -
Tsu01g02884 171 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 PIRSF Glutathion_perox 1 171 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Tsu01g02884 171 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02884 Tsu-Chr1 34765273 34768486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02884 - K00432 gmx:100527283 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02884 01 34765273 34768486 Tsu01g02884 01 34765273 34768486 ECH
Tsu07g03554 07 41669130 41673333 Tsu01g02884 01 34765273 34768486 PCT