Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03553 ATGCCGCCTGGTCGTAGAAAAAGCGCCAAGAAATCAACGGCGGCGGCTACTTCTGTTACTTGCCGGCATTGGAACGTCGGTGATCTTGTCCTTGCTAAGGTTAAAGGCTTCCCTGCTTGGCCTGCAACgGTAAGTCATCCGGAGAAATGGGGCTACTCAACTGATCCGAAGAAAGTATTTGTTCTCTTCTTTGGAACCGAACAAATTGCTTTCTGCAGTCCTGCTGATATTGAGGCATTTACTGAAGAGAAGAAACAGTCTCTTGCCAATCGCCAAGGAAGGGGTTCTGATTTTGTTCGCGCAGTACAGGAGATTATTGAATGTTATGAAAAGTTAAATAGAGGGATCCAAGTTGATGAAACTAGCTCTGGTGGTGAAGTTGCTAATGCAGATGTGGTAAATTCACTTGACGTATCTGCCAATTCAGGATTCGAAGATCACGTGGATTCTCCTTGGACAATCAATTCACAAATGAAATCACCAAATTCTGTGACTGGCAACCCTGAGCTAGTTTATGCAGCTGAGGACGACTCAGTTGTGGCACCAAGGGATGAATCTTATATTAAAAAGGCTACTGCTGATACTGCTGCAACTACAACTGTAAAATCATTTTTGCCAGTGAAACTGGGAAACAAACCAGTTCAAAGGTTCAGAAGCTCATCACAGATCCAAAACTTTGTTGTACCTCGTAGTGATGGTGTAAATAATGGCGGCAACATATCAGCTGATGCAATTCAGAAAAAATCTATTAGAAGGATTAAGCATATCAGGAATTCACCTGACTTTTTTGGTTGTAATGATACCAATTCATCTGCATTTGCCTCAAATGTTAGCATGGAGGAAGATGGTTCTGAAATCAATACAATCAATTCTGACGCCTGTAGCTTAAATGAGGGAAGTGCAATAGATTCTAATTTAAAACTTGAACAATCTAATATTGTCGAGTGCTCTGGATATGAGGTTGGGTTAAACAAAGCCCTTGATTGTGAAATGAAGGCTGTAGTTGgtaagaagaaaagaaaaccaaACAGGATGAGGAAAACCAAGAATGCTGGCACTCAGAATACCAACCAAAGTCTGCATAACATGTCGGAAATTCCGAAAGGGAGATGCTCTGACCAAGAGGGAGATGAACACTTGCCCCTCTTGAAGAGAGCCAGAGTTAGAATGGCCAACTCATCATTCACCAAGGAAAAACACAATAGAATTGCACAAGTACAAGATAAAAGCTGTAAGGAAGTTATTGTTGGCACATCCTCAAATTGTGAAAATGGTTGCCTTGCTGATGGAGACTCGTCGGCATTGAATGGATTTTCAGTTAATGTTTCTCCTAAGTTACTAGCTCCTTGTTCTGAAAATGGGTCTCGTGCTTCTAAAGTTGTGAAAGACCAATTATTTGGCTGCTCTGTGGATGATGAATCTCTTTTACCTCCATGTAAACGCATCCATCGTGCTTTAAAAGCAATGTCTGCCAATGCTGCTGAAGAAGGAGCTTGTATTGAATCGCCACCCTCTGCAATGACAACAAGTGGTAGATGCTTTTCTACAATAAATAACCAAGGAGGTAATGATTTAGAACGGAAAGGGTCGGACTCTTGTGGTATTGAATGTTCTGATAACCAGGTGTGTAGTTTTTCAACCTGTTCAAATCCAATGATTTCAAGAGAGAATAAGTCATCTTTTGAAGAGGATAAACAGTTGGCCAAGTCTCAACAACATGAATCTGGCAAGGATGTCATCCCAGGTGCTAAACATCAAATTGGTGAAGATCCTAGTGATTCTGTGGTTTGTGCGCCTGCTAAAATAGATTCACAAGTTCTGATGCATGAAAAACTTTCTCCTAATCTTGATGTGAAATGTTGTCAAGTTGGAGGCAACCAAGATTCACCAAAGGCCGACGAAAGTATCAGACCTGCAATCCATTCAAATACATCTGATACATTAGATCATTGTGGAATAAATTTTGATCCTGTGGCTGGTCCCAATGAAAATGGCAAATTGTTACCTCAAAAATGTATCAGCATACCTCAGAATTTGATGGTTGAATGCAAGGATATGAAGGGAACAGCTGGTGACTGCAGTAAAATCAATGACACGCATGTGGTTGTGAACGAGGTAAAATGTAAAGGACAACAGGAGGATATGATTTCTCTATCAACATCCAATGGTTGTTCAGGGGAAAAGGGTGCTTTGGGCATTCCGGCAAGCTCATCCTTGACTGATGGGGGGATTTGCATTCCACAAGGTTCACCTCTAAATACATTAGTTCGCAATGTTTCTACATCAGACAGTAGTAATATTCATCAAAATGGAAGTTGTAGCCCTGATGTACTCCAGAAGAACATTTTATCTGTTCCCGTTGATGGATGGAAAGATGGGGCGGTGACAAATCAACGATCAAAATCTATGGACAAGTCAACTGAAACAGGAAATGCTGCTTTGTTATACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAATATTGGTCGAGCAACGCGCATAGCTATTGACTGTGCAAAGTATGGCTTTGCAACAAAGGTGGTGGAAAGTCTTGTGCGCAGTCTGGAATGTGAGTCAAGCCTTCGTCGGAGAGTGGATCTGTTTTTTCTTGTCGACTCCATTGCTCAATGTTCTCGAGGTTCGAAAGGAGATGTTGGAGCAGTATACCCATCTGCAATGGAACCATTCCTGCCACGCCTATTGTCGGCTGTTGCCCCTCCTGGAAATACTCCACATGAAAATCGAAGGCAGTGTCTTAAGGTGTTAAGGCTGTGGTTGGAGCGAAGAATCCTACCAGAATCCACCATTCGCCAACACATCAGGGATCTGAACTCATATAGCAGTTCAGCTTCTGCAGGTGTTTACTCGCGGCGTTCATTGAGAACAGAAAGGGCTTTAGATGATCCTATAAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGTTATCTGGGTTTCGCATGCCCCGTATGGTTGAAGATGGAGGGAGTGATTCTGATGGAGGGAACTTTGATGCTGTCACGCCTCAACATGATTCTGAAGCATATGAAGTACAAGAAGTGTCTCATGCATTTGAAAAACATAGGCGTGTGTTGGAAGATGTTGAGGGAGAGCTTGAAATGGAAGATGTGGCACCCTCTTTTGATGTGGAGTTGAATTCGATTTGCAATGTTGATGGAGGAAATGCGTTACAGCTTGATAAGAATCTTCCTCTGTCCTTTGCTCCTTGTTTACCACAAGATGTGCCATCATCTTCCCCACACCCACCACCATTcgctccaccaccaccaccaccaccaccacctcctccCCCTCCACCTCCACCACCTCTACCAACATTGCATTCTATGTCGACGACCTCTGATCAATATCGCACTGCAGTGGATTCAAAAGTTTTTACAGATTCACAGACAGTGCATGGCAAAACATTTCATTCTCTGGCTCAGCCCATAGTTTCACCAAGAGTTGGTCGACCTATGGATTCAGTGCAGTTTCAAATCCCGGAATGTAGAGACGTGCAGATGCAGATACCAGAGTCTACTCGCTCTTTCAACACTTGCCCTGTACGACCACCAGAAAATTCCAGGACTACTGATGGTTTTACTGTGCATAATAAAGGTTACATACTACGGCCACCACACCGTGTGCCATCGGATCAGTTTTCTTTTGTTAATGCAGAAAATCGTCTGAAGTCTCAGAGGGAGGTTCCATCAACCCCTTCATACTCCAATAGACACCACTCTATGCAGAACATGAAGAGGGAGAACTTCTATAACAATCACGAGAGAAATGGGATGAGATGCAATACTCGAGTACCACATGAAGAGAGATGGAATACTCGTGCAGCACATGAAGAGAGATGGAATACTCGTGCAGCACATGAAGAGAGGTGGTATACTCGTACACCACATGAAGAGAGATGGAATACTCGTACACCACATGAAGAGAGATGGAATACTCGTACACCACATGACGAGAGATGGAATACCCGTGCACCATATTCACCATATTCTgGTGTGTCTGCCTTGTATGGTTGTCATCCAAGTGAATCGCCAAGATCACCAGGCCGTGGTTGGAGATTTCCTCCCCCATCAATGAATTACAGAAACTCCACACCTTTTAGATCACACTTTGATGATGCAATTCCAGCAGCAAACCGAGGCCCAAGCTTTTGGCGGCCTAGGCGAGCAGAAACTACCCGACACTGA 4236 0.4252 MPPGRRKSAKKSTAAATSVTCRHWNVGDLVLAKVKGFPAWPATVSHPEKWGYSTDPKKVFVLFFGTEQIAFCSPADIEAFTEEKKQSLANRQGRGSDFVRAVQEIIECYEKLNRGIQVDETSSGGEVANADVVNSLDVSANSGFEDHVDSPWTINSQMKSPNSVTGNPELVYAAEDDSVVAPRDESYIKKATADTAATTTVKSFLPVKLGNKPVQRFRSSSQIQNFVVPRSDGVNNGGNISADAIQKKSIRRIKHIRNSPDFFGCNDTNSSAFASNVSMEEDGSEINTINSDACSLNEGSAIDSNLKLEQSNIVECSGYEVGLNKALDCEMKAVVGKKKRKPNRMRKTKNAGTQNTNQSLHNMSEIPKGRCSDQEGDEHLPLLKRARVRMANSSFTKEKHNRIAQVQDKSCKEVIVGTSSNCENGCLADGDSSALNGFSVNVSPKLLAPCSENGSRASKVVKDQLFGCSVDDESLLPPCKRIHRALKAMSANAAEEGACIESPPSAMTTSGRCFSTINNQGGNDLERKGSDSCGIECSDNQVCSFSTCSNPMISRENKSSFEEDKQLAKSQQHESGKDVIPGAKHQIGEDPSDSVVCAPAKIDSQVLMHEKLSPNLDVKCCQVGGNQDSPKADESIRPAIHSNTSDTLDHCGINFDPVAGPNENGKLLPQKCISIPQNLMVECKDMKGTAGDCSKINDTHVVVNEVKCKGQQEDMISLSTSNGCSGEKGALGIPASSSLTDGGICIPQGSPLNTLVRNVSTSDSSNIHQNGSCSPDVLQKNILSVPVDGWKDGAVTNQRSKSMDKSTETGNAALLYFEAMLGTLKRTKENIGRATRIAIDCAKYGFATKVVESLVRSLECESSLRRRVDLFFLVDSIAQCSRGSKGDVGAVYPSAMEPFLPRLLSAVAPPGNTPHENRRQCLKVLRLWLERRILPESTIRQHIRDLNSYSSSASAGVYSRRSLRTERALDDPIREMEGMLVDEYGSNSSFQLSGFRMPRMVEDGGSDSDGGNFDAVTPQHDSEAYEVQEVSHAFEKHRRVLEDVEGELEMEDVAPSFDVELNSICNVDGGNALQLDKNLPLSFAPCLPQDVPSSSPHPPPFAPPPPPPPPPPPPPPPPPLPTLHSMSTTSDQYRTAVDSKVFTDSQTVHGKTFHSLAQPIVSPRVGRPMDSVQFQIPECRDVQMQIPESTRSFNTCPVRPPENSRTTDGFTVHNKGYILRPPHRVPSDQFSFVNAENRLKSQREVPSTPSYSNRHHSMQNMKRENFYNNHERNGMRCNTRVPHEERWNTRAAHEERWNTRAAHEERWYTRTPHEERWNTRTPHEERWNTRTPHDERWNTRAPYSPYSGVSALYGCHPSESPRSPGRGWRFPPPSMNYRNSTPFRSHFDDAIPAANRGPSFWRPRRAETTRH 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 1191 1210 - -
Tsu07g03553 1411 Gene3D - 4 108 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 337 375 - -
Tsu07g03553 1411 SMART PWWP_4 24 81 IPR000313 -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 1091 1123 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 557 584 - -
Tsu07g03553 1411 SUPERFAMILY Tudor/PWWP/MBT 20 117 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 556 592 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 348 365 - -
Tsu07g03553 1411 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1305 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 1090 1133 - -
Tsu07g03553 1411 PANTHER PWWP DOMAIN PROTEIN 1 1305 - -
Tsu07g03553 1411 PANTHER PWWP DOMAIN PROTEIN 1305 1404 - -
Tsu07g03553 1411 SMART 558neu5 816 947 IPR006569 -
Tsu07g03553 1411 Pfam CID domain 817 941 IPR006569 -
Tsu07g03553 1411 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1305 1404 - -
Tsu07g03553 1411 MobiDBLite consensus disorder prediction 1388 1411 - -
Tsu07g03553 1411 ProSiteProfiles CID domain profile. 809 950 IPR006569 -
Tsu07g03553 1411 Gene3D - 815 955 IPR008942 -
Tsu07g03553 1411 ProSiteProfiles PWWP domain profile. 26 83 IPR000313 -
Tsu07g03553 1411 Pfam PWWP domain 27 109 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03553 Tsu-Chr7 41651849 41665346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03553 - - mtr:MTR_7g094580 1919.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03553 07 41651849 41665346 Tsu01g02885 01 34784065 34799473 PCT