Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02885 ATGGCCCCTAGCCGTAGAAAGGGAGGCAGCAAAGCAGCGGCTATCGCTGCTGCTGCTCGTCAATGGAAAGTTGGCGATCTCGTTCTTGCTAAAGTTAAAGGGTTTCCTGCATGGCCTGCCACGGTCAGTGAGCCAGAGAAGTGGGGTTACTCCACAGATTGGAAGAAAGTGCTTGTTTACTTTTTTGGAACTCAACAAATTGCTTTCTGTAATCCTGCTGATGTTGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTGTCAAACGTCAAGGAAAGGGTGCTGACTTTGTTCGTGCTGTTAAGGAGATTGTTGATAGTTATGAGcaattaaaaaaagagagacAACTTGGTGAAGCTAACTGTGGTGGCAATGTTGCTGATgcaaatatttcaaattctgTTATTAACTCAGGAGCATCTGATAACTCAGTTTCTTGTGAGGTAACCGCTACTTTACctataaaatcttcaaattcCGTTGTTGACAGACATGATTTGGTATGTCCAGCTGAGGATGACTCAGCTGATGTATTGAAAGACGAATCTAATGATAAGGAGGCATCAAAGAAGGAGCTTAGTGATAATGCGCCGTCTGTACAATCGCCTAAGCCACTTACTTACTCTTCTCGAAAGAGATCTGCTGGTGACTTATGCCCACAGGGCTTCATAACAGATAGACATATGCCAGTACGAAGGAATAGAAGCACATCACGGGTCCAAAACTTCATGTTTCCCTGTAATGACAGTGGAAAGAATGCTGGCAGCCAATTAACAAATGCAACACAGGGTGCATCCGTAAGAAGGAATCAACGTCTTAGGAAATCACCTGATCTTGCTGgctgtaatgattttgattcatCTGCTTCAGTCTTGAATGACAGTGTGGAGGACAAAGACAACAGTTCTGAAATTCTCACAAATGATTCTGATGAATTTAGCTTGAATGAGGGTAGTGCAATGGATTCAAATTATAAACCCATTGAAACTATTGAATGCCCTGAAGACGTTGAGCTGAACAAAGGCCTTGATCTTAAAATAAAGGGTGTGGTCaataagaagaaaagaaacCCAAATAGGAAGAGGGCAACCAACGACTCTTCCAAGTCAACCATTAAACTTGAGGAGGATCTCGGTGTGCGGAATTCCAGTCAAAGTTCCCAGAATATTTGTGGAAATTCCGAAGAGAAATGCTTTGAGCAAGATGGAGATGAACACTTGCCCCTTGTGAAGCGAGCGAGAGTCAGAATGGGTAAATCATCTTCCACAGAGGGAGAACTCAATAACATACCACATGCTCCAGGGAAAAGCTGTAAGGAAGATAATAACTCACCACCGCAGATTATAACATCCTCAAATTGTGAGAATGGAAGCTCTGCTGATGGAGGCTCATCTGTCCTGATTGGAACTGTGGATAATGTTTCTCCTTCAAAGATCGTTGCTCCATGCCCTGATCATCAGATAGGTAATACTAAGAGAGATCAACCATTTTGCTCTGTGGATGATGAAGCTGCTTTACCTCCATCTAAACGTCTTCATCGTGCTTTAGAAGCCATGTCAGCTAATGCTGCTGAAGAAGGTCAAGCTCGTATTGAATCATCATCCTCCAGAATGACATCAATTGGTTTATCGACTATCAAGACAAGTCCAGATAAGACTCTTAATAATCATGAAGGTGGTGGTTTAGAGTTGCAAAAGTCTGATGCCTGCGGTGGTAATTCTTCTCATATCATTGTGCATAGTTTGTCAGCCAATCCAAATCCAATGATTTCAATGGAGAATGATTCATCTAAACAAGTGGATAAGCTGTCAACCAGATTCCAAGCACAAGAAAATGGCGCGGATGTTCTCCCATGTGCTGCAGATCAAAATGTGGTTTGTGATACTGATAAAGCAGATTTGAAAATTCAAGTGCCTAGGGAGATTTCTCCAAATGTTGATTCAAAATGTTGTGAAGTTGAAAGCAATCAAGTTTCACCTCACCTGTCATTACCACCAAATAATGATGACAATATTATAACACTGAATCATTCAAATACAACATCTGATGAATCAGAGCACAATGGAATAAGCCTTCATTCTGAAGCAGATGTGGCTAACAAAGAAATTATTTCCCCTCAAAATAATACTGATCTGCCTCGGAATGAGGTTCTTATTTCTGACGATACAAAGTGCTTGAAACCAGCAGTTTGTGATGTTAACAGAGCAAATGAAATGAGTGAGGTCATAAAAGAGGTAGAATGTGAAGTACCAGAGGAGGATTTGAATTCTGTTTCAACGTCTGACTGTCTAGGTGAAAAGGGTATTTCGGGCATTCGATCAAGTACGTCCTTGACAGATGGGGGAGATTGCATTCCACAAGGTTCACCTCCAAACACATCAGTTTGCAACGTTTCTACATCAGACAGTAGTAATATCCTTCACAATGGCAGCTGTAGTCCTGATGTTCATTTACACCAGAAACAAAGTTTATCTGGTCCTGTTGATGAAAGTAAGTATGGATCTGAAGCAACTCAACAATCAAGTTCAATGGGCAAGTCAACTGAAGCGGCACGCGCTGCTTTGTTGTACTTTGAAGCAATGCTCGGGACACTGAAAAGAACAAAGGAAAGTATTGGCCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGATAAgGTCATGGAAATTCTTGCCCATAATCTAGAATCTGAATCAAGTCTGCATCGAAGGGTGgatttgttttttcttgttgACTCTATTGCACAGTTTTCTCGAGGTTTAAAAGGTGATGTTTGTTTAGTATATTCATCCGCTATACAAGCAGTCCTTCCTCGACTATTATCTGCTGCTGTTCCTCCTGGAAATGCAGCACAAGAGAACCGTAGGCAATGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAGAATCCTACCGGAACCCATGATTCGCCACCATATCCGGGAATTGGATttatataattcaatttctgCAGGTGTTTTTTCACGACGATCATTAAGAACAGAGAGAGCTTTGGATGACCCTATTAGAGAAATGGAGGGTATGCATGTTGACGAATATGGAAGCAACTCAAGTTTGCAGCTACCTGGGTTTTGCATGCCCCGAATGCTTAAAGATGAAGATGACAATGAAGGGAGCGATTCCGATGGAGAGAATTTTGAGGCTGTCACACCTGAGCATATTTCTGAAGTACATGAAATGACATCTACAATTGATAAACACAGGCATATCTTGGAAGCTGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTCGTGATGTTGAAATGAATTCATTTTGCAATGTTGATAGAGGAAATACCAGAGAGTTTCAGAAGAATCTTTCCCTGTCCTCTGCTCCTCTACCTCAGCTTGCACCTCAATGTTCCGCACCACCACCATCAGCCCCTCCGCCACCACCTCTCCCTCCACCACCACTTCCCATGTCACACCTTTCAAATTCCTCTGATCCATGTCGCTCTGTATTTAATTCAACAGGTCATACAGAATCACAGTGTATGAAAGAAAACACACTTCTCCCTATGGTTCAGCCCTTGGCTGCACCAAGTAGTAATAAGCAACCTATTAGTGACTATCATGTTCCAGAATATAGAGAAATGCACGTGCCAGAGTCTACTTGCTCTTTCAACAGTTTCCCCGTACCACCTCCCATAAATTATCGGCATTCTGATGGTGTTTCTATGCATGATAGAAGGCATTCTATAAGGCCGCCTCGCCATGTGCCGTCAAATCAATTTTCCTTTGTTCACGGGGAACAGCATGTGAGACATCGAAGGGAGGTTCCACCACCTCCTCCTTACTCCAATAGGCAACACTTTGTGGAAAACATGGAGAGAGAGCACTTCTATCATAATAATCATGAAAGATTTAAACCACCTCCATATGATTACCGAGAGAGATGGGATGCTCCCCCACCTTATCCTGGTCCTATGTATCATGACGATGATATGCCTTCCCCATATGGGTGTCATCCATGTGAACCACCTAGAATACCAGATCATGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAATAACATGCCATTTAGACCACCCTTTGAAGACGCAATTCCAGCTACAAACAGAGGTCCAAGCTTTTGGCGGCCTAGGTGA 4152 0.4164 MAPSRRKGGSKAAAIAAAARQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLVKRQGKGADFVRAVKEIVDSYEQLKKERQLGEANCGGNVADANISNSVINSGASDNSVSCEVTATLPIKSSNSVVDRHDLVCPAEDDSADVLKDESNDKEASKKELSDNAPSVQSPKPLTYSSRKRSAGDLCPQGFITDRHMPVRRNRSTSRVQNFMFPCNDSGKNAGSQLTNATQGASVRRNQRLRKSPDLAGCNDFDSSASVLNDSVEDKDNSSEILTNDSDEFSLNEGSAMDSNYKPIETIECPEDVELNKGLDLKIKGVVNKKKRNPNRKRATNDSSKSTIKLEEDLGVRNSSQSSQNICGNSEEKCFEQDGDEHLPLVKRARVRMGKSSSTEGELNNIPHAPGKSCKEDNNSPPQIITSSNCENGSSADGGSSVLIGTVDNVSPSKIVAPCPDHQIGNTKRDQPFCSVDDEAALPPSKRLHRALEAMSANAAEEGQARIESSSSRMTSIGLSTIKTSPDKTLNNHEGGGLELQKSDACGGNSSHIIVHSLSANPNPMISMENDSSKQVDKLSTRFQAQENGADVLPCAADQNVVCDTDKADLKIQVPREISPNVDSKCCEVESNQVSPHLSLPPNNDDNIITLNHSNTTSDESEHNGISLHSEADVANKEIISPQNNTDLPRNEVLISDDTKCLKPAVCDVNRANEMSEVIKEVECEVPEEDLNSVSTSDCLGEKGISGIRSSTSLTDGGDCIPQGSPPNTSVCNVSTSDSSNILHNGSCSPDVHLHQKQSLSGPVDESKYGSEATQQSSSMGKSTEAARAALLYFEAMLGTLKRTKESIGRATRIAIDCAKFGIADKVMEILAHNLESESSLHRRVDLFFLVDSIAQFSRGLKGDVCLVYSSAIQAVLPRLLSAAVPPGNAAQENRRQCLKVLRLWLERRILPEPMIRHHIRELDLYNSISAGVFSRRSLRTERALDDPIREMEGMHVDEYGSNSSLQLPGFCMPRMLKDEDDNEGSDSDGENFEAVTPEHISEVHEMTSTIDKHRHILEAVDGELEMEDVAPSRDVEMNSFCNVDRGNTREFQKNLSLSSAPLPQLAPQCSAPPPSAPPPPPLPPPPLPMSHLSNSSDPCRSVFNSTGHTESQCMKENTLLPMVQPLAAPSSNKQPISDYHVPEYREMHVPESTCSFNSFPVPPPINYRHSDGVSMHDRRHSIRPPRHVPSNQFSFVHGEQHVRHRREVPPPPPYSNRQHFVENMEREHFYHNNHERFKPPPYDYRERWDAPPPYPGPMYHDDDMPSPYGCHPCEPPRIPDHGWRFPPRSMNHRNNMPFRPPFEDAIPATNRGPSFWRPR 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 306 320 - -
Tsu01g02885 1383 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1383 - -
Tsu01g02885 1383 CDD HDGF_related 20 104 IPR035496 -
Tsu01g02885 1383 SMART 558neu5 856 987 IPR006569 -
Tsu01g02885 1383 Coils Coil 175 195 - -
Tsu01g02885 1383 Pfam CID domain 857 979 IPR006569 -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 234 269 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 172 192 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 352 390 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 817 845 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 376 390 - -
Tsu01g02885 1383 Pfam PWWP domain 25 107 IPR000313 -
Tsu01g02885 1383 SMART PWWP_4 22 79 IPR000313 -
Tsu01g02885 1383 SUPERFAMILY Tudor/PWWP/MBT 20 115 - -
Tsu01g02885 1383 ProSiteProfiles CID domain profile. 849 990 IPR006569 -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 172 269 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 1040 1063 - -
Tsu01g02885 1383 Gene3D - 14 117 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 415 466 - -
Tsu01g02885 1383 PANTHER PWWP DOMAIN PROTEIN 1 1383 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 1125 1163 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 360 375 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 439 466 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 193 208 - -
Tsu01g02885 1383 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 1362 1383 - -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 292 320 - -
Tsu01g02885 1383 Gene3D - 854 991 IPR008942 -
Tsu01g02885 1383 MobiDBLite consensus disorder prediction 1130 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02885 Tsu-Chr1 34784065 34799473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02885 - - gmx:102664053 1781.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03553 07 41651849 41665346 Tsu01g02885 01 34784065 34799473 PCT