Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03536 ATGGCGGCTATCCAAGAATCACGGACGGATCAACCAAAAACAACACCGCCGCCGTTTCAACAACCACCACCGTTACTCGTCTCCGATTCTTACGCTAAGGATGCCATACTTGCATGGTTTCAAGGCGAGTTTGCTGCTGCTAACGCGATCATCGACGCTCTCTGCGGTCATCTTACAAACGTTGCTTCATCGTCGAACGATTATGATTTAGCGTTTGCTGCTATTCATCGGCGGCGTCTCAACTGGATCCCTGTTATTCAGATGCAGAAGTATCACTCCATTGCTGATGTTACTCTTGAACTGCGTAAGGTCGCTGAGAAGAAAAATGAATCGGTTGAAGGAGCGGTGAAAACTGTGGAGAGTGATGGTTTTGATCAGAAAGTGGTGGTAAGCGTCGGAAATGGCGGTGATGATGCGACGGCGGAATATGATTCGCCGGAGAGTGGGATCACTGAttcagGATCGCGGGAAATTCAACACAGTTTCGTTAACAATAGCATATGTTCAAATCATGAAGAATGTGAAGGACGTTCTTCACAGATAAAGCTGACAAAAGGTTTTGTAACAAAGGAGTTCTTGAAAGGGCATCCGGTGAATGCTGTGAAAGGGTTGAGGCTGtatgaaaacattttttctGAATCACAACTCTGCAAGCTGAATGATTTTGTGAAAGAGATCCATGCTGCTGGCCAGAATGGGGAACTTTCAGGTGAAACCTTCATACTATTTAACAAACAGGTGAAGGGGAACAAGAGAGAGCTGATTCAGTTAGGTGTTCCCATATTTGGACAGATGAAAGACCATGCCAAAAGCATTGAGCCAATTCCATCACTTCTACATGGTGTCATTGATCACCTTATTCAGTGGGAATTGATTCCAGAGTACAAAAGGCCAAATGGTTGCATCATCAACTTCTTTGAAGAGGGGGAGTTTTCTCAGCCATTCATGAAACCGCCGCATTTGGATCAACCTCTATCTACCCTTCTTCTCTCTGAATCTACAATGGCTTTTGGGCGTATTCTTATGAGTGAAGATGATGGGAATTACAAAGGCCCACTCATGCTCTCTTTGAAGCAAGGGTCTCTTTTAGTGATGAGAGGAAACAGCGCTGACATGGCAAGGCATGTGATGTGTCCATCCCCTAACAAAAGGGTGAGCATCACCTTCTTTAGAGGCAGAGAAGACTCCTACCAAGGCCAATTACCAAATCCTCCAACAACATCTGCGATGACTCTTTGGCAACCCGACACTGCCAGTCCATTTGCTTTGCCAAATGGAGCACCAAATGGCTATGAGGCTATGGATATGATGCCCCCATGGGGAATTCTTGGTGCTCCAATGGTCATGCTAACCCCTATGCACCCTATGACAATGAATCCCAGCAAACTTCCTTGCGGAGGGACCGGAGTTTTCTTTCCTTGTTGGAAGGGGCAACCCAGAAAACAGCCAAGGTATCTTCCACCGCGTGCCCACAAAGGACGAGTTATGGCATTACCTTCCCCTGTTAAGTCACACACCGAAGACTCTACTCCTGAACCCACCATTACTGTTGAAAGATAG 1560 0.4583 MAAIQESRTDQPKTTPPPFQQPPPLLVSDSYAKDAILAWFQGEFAAANAIIDALCGHLTNVASSSNDYDLAFAAIHRRRLNWIPVIQMQKYHSIADVTLELRKVAEKKNESVEGAVKTVESDGFDQKVVVSVGNGGDDATAEYDSPESGITDSGSREIQHSFVNNSICSNHEECEGRSSQIKLTKGFVTKEFLKGHPVNAVKGLRLYENIFSESQLCKLNDFVKEIHAAGQNGELSGETFILFNKQVKGNKRELIQLGVPIFGQMKDHAKSIEPIPSLLHGVIDHLIQWELIPEYKRPNGCIINFFEEGEFSQPFMKPPHLDQPLSTLLLSESTMAFGRILMSEDDGNYKGPLMLSLKQGSLLVMRGNSADMARHVMCPSPNKRVSITFFRGREDSYQGQLPNPPTTSAMTLWQPDTASPFALPNGAPNGYEAMDMMPPWGILGAPMVMLTPMHPMTMNPSKLPCGGTGVFFPCWKGQPRKQPRYLPPRAHKGRVMALPSPVKSHTEDSTPEPTITVER 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03536 519 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g03536 519 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 297 393 IPR005123 -
Tsu07g03536 519 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 6 518 IPR044842 GO:0003729|GO:0006402|GO:0032451
Tsu07g03536 519 MobiDBLite consensus disorder prediction 482 519 - -
Tsu07g03536 519 SUPERFAMILY Clavaminate synthase-like 196 389 - -
Tsu07g03536 519 Gene3D - 188 398 IPR037151 -
Tsu07g03536 519 MobiDBLite consensus disorder prediction 503 519 - -
Tsu07g03536 519 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 6 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03536 Tsu-Chr7 41499372 41504778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03536 K10767 - gmx:100776159 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03536 07 41499372 41504778 Tsu07g03536 07 41499372 41504778 ECH
Tsu07g03536 07 41499372 41504778 Tsu01g03871 01 46488177 46493420 PCT