Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu07g03535 | ATGAATTTCTTCAAATCCGTTTTCTCCGACGACCCGGACCCGTCAGGATCCGAATCCAACAACGCTTCCTCCACCGACTCACCAAACGCGCCACCTTCCGATTCTTCTCCGTCACACCACCACCGCAATCCTTCCGCTTCATGGAAGAATCTAATCAAAACCCTAAGCGAAAAATCCGAATCCGTAATCGAAATTTACCGTCGCGATCTTCAAGAATTCGGTACAGGATTGAAGAAAGAGATAGAAGTTGCACACGATTCTCTTGAAACGGTTGGACACGTCATCGATCAATTTGGAAATACCGTTATTAAAGGAACGGCTCAGATTATATCTCAAGGAAAAGAAGCCATTCTTGAATCTGATTCTGTtcagaagaagaataagaaacaGAGTAGTTTGAATTCGAAGAAGTATAGTAGATTTGATGCACAAATTCGTGCAATTCAGGGTGATGTTAATACTTATATTGAAGAACCTTTTGATTTGGAGCGTTATAATAAGTGGAAATTGGAGTTTTCTTTGGAAgggaaaaatgaagaaattgaagggTTATTAAAAGAGAATGATGAAATGGAGAGTATTTATAACAGGGTTGTTCCTAATAATGTTGATAGGGAAACtttttggttaaggtattattATAAGGTTTATAAGGTTAAGAAAGCTGAGGATATTAGGGCTAAGCTTGTGAGACGAATGTCgaaggaagaggatgaagatttgagtTGGGATGTTGAAGATGAGAAGTatgtggatgatgatgatgatgacgatgatgatagtgatgatgatgaggaggaAGAGGACTCTAAGGTTGAAAAGAGAGATAGTTTATTGCAAAACAAGATGATGGAGGAATCAAAAGTTGATGAGAATTTGGAGGTTGTTCAAGAGAAAGTGGATAATGTTAATGATTCTGATAAGAAAATGTCAATGGAGAGGAAGGTTGGCGATGGAAAGTCTTCGCCGGTTGTAAGTAAGAACTTGGAGCATAAGGATGAGGAGAAAGATCTTGAGTGGGATGAGATTGAGGATCTTAATAGCATTCATGAAAAGAAGGCAATGGGGGAGAGTGGTAGCGCGAGCAAAGTTGATTTACTGAAGCGGCTGAGTTCTGTGGCCGAAGAAGAAGATTTGAGTTGGGatattgaagatgatgatgagcctTCCAAGGcttga | 1179 | 0.3461 | MNFFKSVFSDDPDPSGSESNNASSTDSPNAPPSDSSPSHHHRNPSASWKNLIKTLSEKSESVIEIYRRDLQEFGTGLKKEIEVAHDSLETVGHVIDQFGNTVIKGTAQIISQGKEAILESDSVQKKNKKQSSLNSKKYSRFDAQIRAIQGDVNTYIEEPFDLERYNKWKLEFSLEGKNEEIEGLLKENDEMESIYNRVVPNNVDRETFWLRYYYKVYKVKKAEDIRAKLVRRMSKEEDEDLSWDVEDEKYVDDDDDDDDDSDDDEEEEDSKVEKRDSLLQNKMMEESKVDENLEVVQEKVDNVNDSDKKMSMERKVGDGKSSPVVSKNLEHKDEEKDLEWDEIEDLNSIHEKKAMGESGSASKVDLLKRLSSVAEEEDLSWDIEDDDEPSKA | 392 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 241 | 336 | - | - | |
| Tsu07g03535 | 392 | Coils | Coil | 174 | 194 | - | - | |
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Tsu07g03535 | 392 | Gene3D | BSD domain | 129 | 231 | IPR035925 | - | |
| Tsu07g03535 | 392 | SUPERFAMILY | BSD domain-like | 138 | 225 | IPR035925 | - | |
| Tsu07g03535 | 392 | Coils | Coil | 219 | 239 | - | - | |
| Tsu07g03535 | 392 | ProSiteProfiles | BSD domain profile. | 168 | 220 | IPR005607 | - | |
| Tsu07g03535 | 392 | Pfam | BSD domain | 168 | 224 | IPR005607 | - | |
| Tsu07g03535 | 392 | PANTHER | SYNAPSE-ASSOCIATED PROTEIN | 83 | 386 | - | - | |
| Tsu07g03535 | 392 | PANTHER | SYNAPSE-ASSOCIATED PROTEIN | 1 | 83 | - | - | |
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 373 | 392 | - | - | |
| Tsu07g03535 | 392 | Coils | Coil | 392 | 392 | - | - | |
| Tsu07g03535 | 392 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 83 | - | - | |
| Tsu07g03535 | 392 | PANTHER | PROTEIN, PUTATIVE-RELATED | 83 | 386 | - | - | |
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 241 | 270 | - | - | |
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 271 | 316 | - | - | |
| Tsu07g03535 | 392 | MobiDBLite | consensus disorder prediction | 12 | 47 | - | - | |
| Tsu07g03535 | 392 | SMART | wurzfinal6 | 168 | 220 | IPR005607 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu07g03535 | Tsu-Chr7 | 41497485 | 41498730 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu07g03535 | - | - | mtr:MTR_7g094240 | 503.827 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu07g03535 | 07 | 41497485 | 41498730 | Tsu07g03535 | 07 | 41497485 | 41498730 | ECH | |
| Tsu07g03535 | 07 | 41497485 | 41498730 | Tsu01g03870 | 01 | 46485152 | 46487016 | PCT |