Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03870 ATGAATTTCTTCAAATCCGTTTTCTCAGACGACCCAGATCCACCTCGGCCCGAATCTCAACCCGAGCCCAACAATGCGGACCCGAATCCCAATTCCGCCACCGCCGACGATGCTTGGAACTTCGGCGGACTCATCAAAACCCTCACAGCCAAATCCGAATCCATAATCGAAACCTACCGTCGTGATCTACAGGAATTCAGTACTGGATTGAAGAACGAGATCGAAGTTGCTCAAGATTCAGTTGGTGAGATCGGAAGCACCGTCATCAAAGGAACTGCTCAGATCATATCTCAAGGTAAGGAAGCAATCCTCGCCGTTAATCTCGATTCCGATAATGCCACTGCCACCGCCACCACCAATCGCGATTCCAATAGCTTAGATTCGAAGCGATATAGTAGATTTGATGCTCAGATTGGTGCAATTCAGGGTGATGTTGGGACTTATACTGAGGTACCTGAGGATTTGAGTGAATTCAATGAGTGGAAATTAGGGTTTGTGTTGGATGGAAAAAGTGATGAAATGGAGAGTCTTTTTAAGGAGAATGATGCAATGGAGAGTGTTTATAAAAGGATTGTTCCAAATAGTATTGATCATGAAACTTTTTGGTATAGGTATTATTATAAGGTTTATAGGCTTAAGAAAGCTGAAGATGTTAGGGCTAAGCTTGTTAGAAGAATATCTAAGGATGAAGAGGATTTGAGTTGggatgttgaagatgatgatgacgatgataATGATGAGGATGGTGTCGAGGAAAAGGAGAAGGAGAATGAAGGTGAAAATTCGGGGAAAAGTGTAGATACTGATTTGAAAATTGGTGCATCTAGCTCTGGTTCTAGTGACGAGAAGAGATTGAGTGTGGAAGAGGTGAAGCATTTAGAGtctaaagaagaaaagagagacGATTCAATGCAAAGCAATGAGCTTGGCAATGAGATGGGTAAGTCTGTTGAGGAATCGCGAGTTGTTGAGAAAGCCGAAGAAGTTGTTAATGAGATGGGTGGTGGAAATGAGGAAAGGAATGAGGATGATGGTGTTGATAAAACATTAAAGTCAGTAGTAGTTGATGGTGCTGCGAGTGCGGATAAGGATGTTTCTGTGGGTGAGGAAGTGATAGAAGTGGAAAGAAATGCTGCTGATGTAAAATTTTCTAGTAGCAAGAATAATGAGTCGTCAGTGATTGAAAGTCAGCACATTGAAAATGAGGAGGAAGATGATCTTGGGTGGGATGATATCGAGGATCTTAGCGGTATCGATGATAAGAAAGAAActcaatctcagagtcagagTGGTAGCATCAGCAAGGATGATTTGCGGAAGCGCCTTAGTACTGCAGAGGAAGACGAAGACTTGAGTTGGGacattgaagatgatgatgatgagcctGCAAAGGCTTGA 1398 0.4006 MNFFKSVFSDDPDPPRPESQPEPNNADPNPNSATADDAWNFGGLIKTLTAKSESIIETYRRDLQEFSTGLKNEIEVAQDSVGEIGSTVIKGTAQIISQGKEAILAVNLDSDNATATATTNRDSNSLDSKRYSRFDAQIGAIQGDVGTYTEVPEDLSEFNEWKLGFVLDGKSDEMESLFKENDAMESVYKRIVPNSIDHETFWYRYYYKVYRLKKAEDVRAKLVRRISKDEEDLSWDVEDDDDDDNDEDGVEEKEKENEGENSGKSVDTDLKIGASSSGSSDEKRLSVEEVKHLESKEEKRDDSMQSNELGNEMGKSVEESRVVEKAEEVVNEMGGGNEERNEDDGVDKTLKSVVVDGAASADKDVSVGEEVIEVERNAADVKFSSSKNNESSVIESQHIENEEEDDLGWDDIEDLSGIDDKKETQSQSQSGSISKDDLRKRLSTAEEDEDLSWDIEDDDDEPAKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03870 465 MobiDBLite consensus disorder prediction 399 413 - -
Tsu01g03870 465 PANTHER PROTEIN, PUTATIVE-RELATED 79 324 - -
Tsu01g03870 465 PANTHER PROTEIN, PUTATIVE-RELATED 1 77 - -
Tsu01g03870 465 PANTHER PROTEIN, PUTATIVE-RELATED 329 459 - -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 282 306 - -
Tsu01g03870 465 PANTHER SYNAPSE-ASSOCIATED PROTEIN 79 324 - -
Tsu01g03870 465 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 77 - -
Tsu01g03870 465 PANTHER SYNAPSE-ASSOCIATED PROTEIN 329 459 - -
Tsu01g03870 465 Gene3D BSD domain 121 244 IPR035925 -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 1 38 - -
Tsu01g03870 465 ProSiteProfiles BSD domain profile. 161 213 IPR005607 -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 434 448 - -
Tsu01g03870 465 Pfam BSD domain 161 217 IPR005607 -
Tsu01g03870 465 Coils Coil 212 232 - -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 234 323 - -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 234 254 - -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 381 395 - -
Tsu01g03870 465 MobiDBLite consensus disorder prediction 375 465 - -
Tsu01g03870 465 SMART wurzfinal6 161 213 IPR005607 -
Tsu01g03870 465 SUPERFAMILY BSD domain-like 131 218 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03870 Tsu-Chr1 46485152 46487016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03870 - - gmx:100792113 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03870 01 46485152 46487016 Tsu01g03870 01 46485152 46487016 ECH
Tsu07g03535 07 41497485 41498730 Tsu01g03870 01 46485152 46487016 PCT