Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03493 ATGGCTGATACCACCAAATATGTTCCTATAGCCACCACTACTACTggaaataataacaacttacaCAAATTAGACTTCAAAAACCTCTTcaccattttcaaaactaaaaCCACTATTGCTTTTGCTTATGCTTTTATGCTTGTTTTCATTGCTTTCACTCTTTTCTTAGCTTTTTCACCTTCTCCTACTATTTCCACTTCACCTTCTTCCACTTCTcaattttcttccattttttcatactttttccCAAACACCACCAATCTTCAATATCCTTTTGATCCACTTCAAAATAACACTTCTATTTCTAGATCTACCAATGTAACTACTTTTTCTCAAGATGATGCACTTTCAGTTCCAACCACAAACAACACCATAATCACCAATTCCACTTCACAAGATGATGCTGTTTCAGTTCCAACCACAAATAACACCATAATCAACAATTCCACTTCACAAATTGTGAAGAAAAAGGAAGATTCATCTTCTGGTGtcaaaaatcatacttcaaattttGATGAAACTACGAAACCTGTGAACACAAATCATACCACAAATGCTACTTCACAAATTGTGAAAAAGGAAGATTCATTTTCTGGTGAAGCAAAAATCAATGCTATGAATTCAAATCAAACGACAAATGCTACTGTTAAAGGAGTTTCAAATCTTCCTGAGAAGAATTTGAGTTCTAATTCTTCATTGAAAGGTGCTGATTTGAACAATTATACTCAATCACTTGCTAAGAAAAAGAATAATGGGAACAAGAAATATGCTGAGTTGATGGAGTCTTTGatgaattgtgatttttttgatgGTGAATGGGTTAAAGATGATTCTTATCCTCTTTATAAACCTGGTTCTTGTTCATCAATTATTGATGAACAGTTCAATTGTATTCGAAATGGAAGACCTGATAAAGATTATCAGAAATATAAATGGAAACCTAAGGGTTGCACTCTTCCAAGGTTGGATGGACATAAGCTGCTTGATTTGTTGAAAGGCAAAAGACTGGTTTTTGTTGGTGATTCTTTGAATAGGAATATGTGGGAATCACTTATTTGTATACTAAGAAATtctgtgaaaaataaaaagaaagtttaTGAAGCAAATGGAAGAGTCCATTTTAGAGGGGAAGCTGCTTATTCATTTATATTCAAGGATTATAACTTCTCTGTGGAGCTTTTTGTGTCACCATTCTTAGTTCAAGAGTGGGAAATGCCTGATATAAATGGAACAAAGAAGGAAACGCTTCGTCTTGATTTAGTTGGTCGATCTTCAGATCAATATAAAGATGCAGATATTATTGTCTTTAATACTGGTCATTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGGTTATTACCAAGAAGGTAGCCATGTCTATGATGAATTGAATGTTCTTGAGGCGTTCCGAAGAGCTATAACAACTTGGGGCAAGTGGGTTGATGCCAAAGTAAATCCATCCAAGTCCCTAGTCTTGTTTAGAGGCTATTCTGCTTCTCATTTCAGtGGTGGGCAATGGAATTCGGGTGGAGCATGTGACCATGAAACTGCTCCCATTGACAACGAGAAGTACCTAACAGAGTACCCGCCTAAGATGAGGGTGTTGGAGAAGGTGCTTAAGTATATGAAAACACCTGTATCCTACCTGAATATCACTAGGATGACCGATTTTCGAAAGGACGGTCATCCTTCAGTATATAGGAAGCAGAATCTGTCACCTGAAGAAAGAAAATCACCATTGAGATACCAAGACTGCAGTCATTGGTGCCTTCCGGGTGTTCCTGATGCGTGGAATGAGATTCTCTATGCTGAAATTTTAATGAGAGAGTACCGAAATAAGCAGCCGCAGAAGAGAACATAG 1863 0.3468 MADTTKYVPIATTTTGNNNNLHKLDFKNLFTIFKTKTTIAFAYAFMLVFIAFTLFLAFSPSPTISTSPSSTSQFSSIFSYFFPNTTNLQYPFDPLQNNTSISRSTNVTTFSQDDALSVPTTNNTIITNSTSQDDAVSVPTTNNTIINNSTSQIVKKKEDSSSGVKNHTSNFDETTKPVNTNHTTNATSQIVKKEDSFSGEAKINAMNSNQTTNATVKGVSNLPEKNLSSNSSLKGADLNNYTQSLAKKKNNGNKKYAELMESLMNCDFFDGEWVKDDSYPLYKPGSCSSIIDEQFNCIRNGRPDKDYQKYKWKPKGCTLPRLDGHKLLDLLKGKRLVFVGDSLNRNMWESLICILRNSVKNKKKVYEANGRVHFRGEAAYSFIFKDYNFSVELFVSPFLVQEWEMPDINGTKKETLRLDLVGRSSDQYKDADIIVFNTGHWWTHDKTSKGKGYYQEGSHVYDELNVLEAFRRAITTWGKWVDAKVNPSKSLVLFRGYSASHFSGGQWNSGGACDHETAPIDNEKYLTEYPPKMRVLEKVLKYMKTPVSYLNITRMTDFRKDGHPSVYRKQNLSPEERKSPLRYQDCSHWCLPGVPDAWNEILYAEILMREYRNKQPQKRT 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03493 620 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 27 613 IPR029962 GO:0016413
Tsu07g03493 620 MobiDBLite consensus disorder prediction 149 193 - -
Tsu07g03493 620 Pfam PMR5 N terminal Domain 265 317 IPR025846 -
Tsu07g03493 620 MobiDBLite consensus disorder prediction 164 193 - -
Tsu07g03493 620 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 27 613 - -
Tsu07g03493 620 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 319 604 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03493 Tsu-Chr7 41142172 41146464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03493 - - gmx:100811425 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03493 07 41142172 41146464 Tsu07g03493 07 41142172 41146464 ECH
Tsu07g03493 07 41142172 41146464 Tsu01g01985 01 20182965 20186267 PCT