Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01985 ATGGGTGAATCTATCAAACATGTTTCCAACTTAAACATCAAAAGTCTCTTTTCCTTTCTCAAAACCAGAAAAGCAACTACTTTTGCTTATGCTTTTATGCttgcttttgtttctttaactgTTTTCTTAGCCTTTTTTCCTTCTCCAAATGCTTCATCTCCTTTGTTCAATAACATATTCACCACAAAAACTTCCATTTCTGGTTCTTATAAATCTCAACTTTCtaacattttctcattcttttacCACAATACAAccacttcttcatcttcaccttTTAGCAACAGTTCTGGATCTAGCAATAACAACACTTCTCAATCTTCTAACACAACTACAAAAACATTCAAAGCAACCACTTTTGGAAACAAAACACAGAACCTTCTTAACCCATCTCATGATTCTGTTTCAACCACCAACCAAACCTCTCATCAAGTTTCTAATGAAACTAAACATCAGaagaaaacaaatcaaactGCAAATAAGGATGTTGTGTTAAGTAATAACCAAACTGCTTTGAAGGTGAAGGATGAGATTCATATGATTGAATCTTTGATGaagtgtgatttttttgatGGAAAATGGGTTAAGGATGAATCTTATCCTCTTTATGAACCTGGTTCTTGCAATTTGATTGATGAACAGTTCAATTGTATTAACAATGGAAGACTTGATAAAGATTATCAGAAATATAAGTGGAAGCCTAATGGGTGTAGCCTCCCAAGGTTGGATGGACACAAAATGCTTGATTTGTTGAGAGGCAAGAGACTTGTTTTTGTTGGTGATTCCATCAATAGGAATATGTGGGAATCTCTTATTTGCATCCTCAGAAACTCTGTGAAAGATAAAAGTAAAGTTTTTGAAGCAAATGGAAGAAGCCATTTTAAAGGAGAATCCTCTTATTCATTTGTTTTCAAAGATTACAACTTCTCGGTCGAGCTTTTTGTATCACCGTTCTTAGTTCAGGAGTGGGAAACTATGGTTAAGAATGGAACAAAGAAGGAAACACTTCGGCTTGATTTGGTTGGTAGATCGTCGGATCAATACAAAGAGGCAGATATAATCATCTTCAACACCGGTCATTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAAGGTAGTCATATCTATAATGAATTGAATGTTTTGGAGGCATTTCGAAAAGCGATAACAACCTGGAGCAGATGGGTTGATGCTAACATAAATACATCCAAGTCTATGGTCTTCTTCAGAGGCTATTCTTCTTCACATTTTAGTGGAGGGCAATGGAATTCAGGTGGACAATGTGACAGTGAAATCGTCCCGATCAAGAACGAAAAATACTTGAGACAATACCCTCCTAAGATGAGAGTTTTGGAAAAGGTACTGAGGAATATGAAGACACATGTCACCTACTTAAACGTCACGAAAATGACAGATTTCCGTAAAGATGGTCATCCTTCTATCTACAGAAAGCAAAACCTATCACCCGACGAAAGGAAATCGCCGTTAATGTACCAAGACTGCAGCCATTGGTGTCTGCCTGGTGTTCCTGATACATGGAATGCAATTCTCTATGCAGAGCTTCTAATAAaacaatatcaaaatcaaaatcatcattgA 1614 0.3414 MGESIKHVSNLNIKSLFSFLKTRKATTFAYAFMLAFVSLTVFLAFFPSPNASSPLFNNIFTTKTSISGSYKSQLSNIFSFFYHNTTTSSSSPFSNSSGSSNNNTSQSSNTTTKTFKATTFGNKTQNLLNPSHDSVSTTNQTSHQVSNETKHQKKTNQTANKDVVLSNNQTALKVKDEIHMIESLMKCDFFDGKWVKDESYPLYEPGSCNLIDEQFNCINNGRLDKDYQKYKWKPNGCSLPRLDGHKMLDLLRGKRLVFVGDSINRNMWESLICILRNSVKDKSKVFEANGRSHFKGESSYSFVFKDYNFSVELFVSPFLVQEWETMVKNGTKKETLRLDLVGRSSDQYKEADIIIFNTGHWWTHDKTSKGKDYYQEGSHIYNELNVLEAFRKAITTWSRWVDANINTSKSMVFFRGYSSSHFSGGQWNSGGQCDSEIVPIKNEKYLRQYPPKMRVLEKVLRNMKTHVTYLNVTKMTDFRKDGHPSIYRKQNLSPDERKSPLMYQDCSHWCLPGVPDTWNAILYAELLIKQYQNQNHH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01985 537 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 78 IPR029962 GO:0016413
Tsu01g01985 537 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 168 533 - -
Tsu01g01985 537 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 168 533 IPR029962 GO:0016413
Tsu01g01985 537 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 239 524 IPR026057 GO:0016740
Tsu01g01985 537 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 78 - -
Tsu01g01985 537 Pfam PMR5 N terminal Domain 186 237 IPR025846 -
Tsu01g01985 537 MobiDBLite consensus disorder prediction 90 162 - -
Tsu01g01985 537 MobiDBLite consensus disorder prediction 90 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01985 Tsu-Chr1 20182965 20186267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01985 - - cam:101512080 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01985 01 20182965 20186267 Tsu01g01985 01 20182965 20186267 ECH
Tsu07g03493 07 41142172 41146464 Tsu01g01985 01 20182965 20186267 PCT