Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03370 ATGACAGTCACACCTAAGATCTCTGTTAATGATGGTAACTTGGTTGTCCATGGCAAGACCATACTGAAAGGAGTCCCAGAAAATGTTGTGCTTACTCCAGGTTCTGGTAATGGTCTTCTTAACGGCGGTGCATTCATTGGTGCTACGGCTTCCCATACCAAAAGCCTCCATGTTTTTCCCATTGGCATCTTAGAGGGGCTGCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACACAGAGAATGGGAACTTGCGGAAGGGATATTCCTTTGGAGACTCAATTCCTGCTTATAGAGAGCAAAGACAGTGAAGGGGAAGATAAAAATTCTCCAATCATCTACACTGTCTTGCTACCTCTATTGGAAGGTCCATTCCGATCTGTTCTACAAGGCAATGAAAAAAGCGAGATCGAAGTTTGCTTCGAGAGTGGGGATCATGCTGTTGAGACAAATCAAGGCCTTCACATGGTTTACATGCATGCTGGAACCAACCCTTTTGAAGTTATCAACCAAGCTGTCAAGGCTGTGGAAAAGCACATGCAAACATTTCATCATCGTGAGAAGAAAAGACTACCATCTTTTCTTGACTGGTTTGGTTGGTGCACATGGGATGCTTTCTATACTGATGTAACAGCTGAGGGTGTTGAGCAAGGCCTGAAAAGTCTATCAGAGGGAGGTACACCTCCACGGTTCCTCATCATTGATGATGGCTGGCAACAGATTGAAAGTAAAACGAAGGATCCTGGTTGTGTTGTACAAGAAGGAGCACAGTTTGCTACAATGTTGACTGGGATTAAAGAGAATGCTAAAtttcaaaagaagaagaatggacaGAACAACGACCAGCCAGAGCAGACATCGGGTCTTAAACATCTTGTAGACGGAGTAAAGCAACATCACAATGTCAAAAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCGGCAACTGGGATGGAACATTACGACACTGCCTTGGCATACCCAGTACAATCACCAGGAGTACTCGGAAATCAACCAGACATTGTCATGGACAGCTTGTCTGTACATGGCCTCGGTCTAGTACACCCGAAGAAGGTTTTCAACTTCTACAACGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGACGGAGTGAAGGTAGATGtgcaaaatattattgaaacccTTGGTGCTGGACATGGTGGCCGAGTCTCACTTACACGCAGCTATAATCATGCGCTCGAGGCTTCCATTTCTCGTAACTTTTCCGACAATGGATGCATTGCGTGTATGTGTCACAACACTGATGGCCTTTACAGTGCTAAGCAGACTGCTGTTGTAAGAGCCTCTGATGATTTTTACCCGCGTGATCCCGCTTCCCACACCATCCATATTTCATCTGTTGCATACAATTCACTTTTCCTTGGAGAGTTTATGCAACCAGATTGGGACATGTTCCATAGTTTACATCCAGCAGCAGAATATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCAATTTATGTCAGTGATAAACCAGGCAACCATAATTTTGATCTTCTTAAGAAACTGGTTCTTCCTGATGGTTCGGTTCTCCGTGCTAAGTTACCCGGAAGGCCTACGCGCGACTCTCTCTTTGTTGATCCGGCAAGAGATAGGACTAGCTTGCTCAAAATATGGAACATGAACAAATGTAATGGAGTTGTTGGTGTATTTAATTGCCAAGGTGCTGGGTGGTGCAAGGTAGAGAAGAAAACTCGAATTCACGATACGTCTCCTGGTACACTCACTGGTTCTGTTTGTGCTTCTGATGTTGATCTCATCAACCAAGTAGCTGGTGCTGAATGGCATGGGGAGACTATTGTTTTTGCTTACAGATCAGACGAGGTGATTCGACTACCAAAAGGGGTTTCGATTCCAGTGACACTAAAGGTTCTGGAGTTTGAACTTTTCCATTTCTGTCCAATCCAAGAAATAGCACCGAGTATATCATTTGCAGCAATAGGCCTAATGGATATGTTCAACACTGGAGGAGCTGTGGAAGAGGTTGAAATACACACAGCCTCTGATAACAAACAACAACTATTTGATGGCGAGGTTGTATCGGAACTTACCACTTGTTCTCTTAGCCCTAACCGAACGAAAACAGCAACTATTGCTCTAAAGGTAAGAGGAAGTGGCAAGTTTGGAGTTTACTCCTCTCAGCGTCCACTCAAGTGCACAGTAGATGGCGCTGAAACGGACTTCAACTATGAGTTAGAGACTGGGTTGACAACCTTCACCATCCCAGTTCCTCAAGAAGAGATGTACAAATGGTTGATTGAGATTCAAGTTTAA 2343 0.4388 MTVTPKISVNDGNLVVHGKTILKGVPENVVLTPGSGNGLLNGGAFIGATASHTKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFLLIESKDSEGEDKNSPIIYTVLLPLLEGPFRSVLQGNEKSEIEVCFESGDHAVETNQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFHHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEQGLKSLSEGGTPPRFLIIDDGWQQIESKTKDPGCVVQEGAQFATMLTGIKENAKFQKKKNGQNNDQPEQTSGLKHLVDGVKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYNHALEASISRNFSDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLPDGSVLRAKLPGRPTRDSLFVDPARDRTSLLKIWNMNKCNGVVGVFNCQGAGWCKVEKKTRIHDTSPGTLTGSVCASDVDLINQVAGAEWHGETIVFAYRSDEVIRLPKGVSIPVTLKVLEFELFHFCPIQEIAPSISFAAIGLMDMFNTGGAVEEVEIHTASDNKQQLFDGEVVSELTTCSLSPNRTKTATIALKVRGSGKFGVYSSQRPLKCTVDGAETDFNYELETGLTTFTIPVPQEEMYKWLIEIQV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03370 780 Gene3D Aldolase class I 199 526 IPR013785 -
Tsu07g03370 780 Pfam Raffinose synthase or seed imbibition protein Sip1 7 763 IPR008811 -
Tsu07g03370 780 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 780 - -
Tsu07g03370 780 PANTHER - 1 780 IPR008811 -
Tsu07g03370 780 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03370 Tsu-Chr7 40121641 40127562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03370 1 554 Glycoside Hydrolase AT3G57520 81.982 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03370 K06617 - gmx:100807861 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03370 07 40121641 40127562 Tsu07g03370 07 40121641 40127562 ECH
Tsu07g03370 07 40121641 40127562 Tsu01g01864 01 18710433 18715486 PCT