Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01864 ATGACGGTGACACCTAGGGTATCGGTTAGCGACGGTAATCTGGTGGTTCATGGGAAGACCATACTGAGTGAAGTTCCAGACAACATTGTGCTAACACCAGGAACTGGAAATGGCATTGTGACTGGTGCTTTTATTGGTGCCACTGCTTCCAACACCAAAAGCCTCCATGTCTTTCCCATCGGTGTCTTACAGAATCTTCCATTCTTGTGTTGCTTCCGGTTCAAGTTATGGTGGATGACACATAGAGTGGGAACTTGTGGAAGGGATATCCCTTTGGAGACTCAATTCATGCTTATAGAGATCAAAGAAAGTAACAATCAACAGCAAAATTCTCCAGTCATCTATACAGTCTTGCTTCCTCTATTGGAAGGCCAGTTTCGTGCTGTCCTACAAGGAAATGACAAAAATGAAATAGAGATTTGCCTAGAAAGTGGAGATCCTGCTGTTGTGACAAATCAAGGCCTTCACCTGGTCTACATGCACACTGGGACCAACCCCTTCGAAGTCATCAACCAAGCTGTCAAGGCGGTTGAAAAACAAATGCAAACTTTCCTTCACCGTGAGAAGAAAAGATTGCCGTCTTTTCTTGATTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTATTGAGGAAGGCTTGAAAAGCCTATCGGAGGGAGGCACATCTCCACGGTTCCTCATCATTGATGACGGTTGGCAACAAATCGAAAGTAAACCAAAAGATGCTGATTGTGCTGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTAttaaagaaaacaccaaatttCAAAAGAACGGTGAGAGCAATGGCCTGAAGCATGTTGTGGATCAAACAAAGCAACGTCACAATGTGAAACATGTTTATGTTTGGCACGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCGGCCACAATTGGAATGGAACATTACGACACTTCCTTGGCATACCCAATACATTCTCCAGGCGTCCTAGGAAACCAACCAGATGTCGTCATGGATAGTTTGGCTGTCCATGGCTTAGGTCTGGTTCATCCGAAAAAGGTCTTCGATTTCTACAACGAGCTCCATGCTTACTTAGCTTCGTGTGGAGTAAATGGAGTGAAGGTTGATGTGCAAAACATTATTGAGACCCTTGGTTCAGGACATGGTGGCAGAGTCTCTATCACACGTAGCTATCATCAAGCGCTTGAGGCTTCTATTGCTCGAAATTTTCGCGACAATGGATGCATTGCCTGCATGTGTCACAATACCGATGGCCTTTATAGTGCCAAGCAGACTTCTGTTGTGAGAGCCTCCGATGACTTTTACCCACATGATCCTGCTTCCCACACCATTCATGTTTCGTCTGTTGCATATAACTCGATTTTCCTTGGGGAATTCATGCAACCTGACTGGGACATGTTTCACAGTTTACATCCAGCGGCCGAGTATCATGCTGCAGCTCGTGCAATCAGTGGAGGTCCAATTTATGTCAGTGATAAGCCAGGAAGGCACAATTTTGATCTTCTAAAGAACCTGGTTCTTCCCGATGGCTCAGTCCTTCGCGCTCAGTTACCTGCCCGACCTACTCTTGACTCTCTCTTTGTTGATCCAGCAAGAGATGGAACTAGcTTGCTCAAAAtatggaatttgaacaaatgtAGTGGAGTGATTGGTGTATTTAACTGTCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAAAACCGTATTCATTGTGAAACCCCTGGTACACTTACTGGCTCTGTATGTACTTCTGATGTTGACCTCATTGCTCAAGTAGCCGATGCTGATTGGAACGGCGATGCAGTTGTTTATGCTTACAGATCAGGCGACGTAATTCGACTACCAAAAGGTGCTTCAATACCAGTGACTCAAAAAGTTCTAGAGTATGAGCTTCTCCATTTCTATCCAATCAAGGAAATTGTTCAAGGTATTTCATTTGCGCCGATAGGGCTATTGGATATGTTTAACACTGGAGGAGCCGTGGAACAGTTTAAAATTCACAAAGCAAGTAAAGTGCATGATGGAGGTTCAGCATATGTTAGCCTCAGAGTGAGGGGAAGTGGAAGATTTGGAGTTTACTCCTCCCAGAAACCATTGAAGTGTGTGGTGGATGACAATGAAACTGAGTTCAACTATGAATCAGAAACTGGGTTGACAACTTTTTACATCCCAGTTCCAGTTGAGGATATGTATATATGGCCAATAGAGATACATGTATAG 2253 0.4394 MTVTPRVSVSDGNLVVHGKTILSEVPDNIVLTPGTGNGIVTGAFIGATASNTKSLHVFPIGVLQNLPFLCCFRFKLWWMTHRVGTCGRDIPLETQFMLIEIKESNNQQQNSPVIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDPAVVTNQGLHLVYMHTGTNPFEVINQAVKAVEKQMQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGIEEGLKSLSEGGTSPRFLIIDDGWQQIESKPKDADCAVQEGAQFATRLTGIKENTKFQKNGESNGLKHVVDQTKQRHNVKHVYVWHALAGYWGGVKPATIGMEHYDTSLAYPIHSPGVLGNQPDVVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVNGVKVDVQNIIETLGSGHGGRVSITRSYHQALEASIARNFRDNGCIACMCHNTDGLYSAKQTSVVRASDDFYPHDPASHTIHVSSVAYNSIFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGRHNFDLLKNLVLPDGSVLRAQLPARPTLDSLFVDPARDGTSLLKIWNLNKCSGVIGVFNCQGAGWCKIEKKNRIHCETPGTLTGSVCTSDVDLIAQVADADWNGDAVVYAYRSGDVIRLPKGASIPVTQKVLEYELLHFYPIKEIVQGISFAPIGLLDMFNTGGAVEQFKIHKASKVHDGGSAYVSLRVRGSGRFGVYSSQKPLKCVVDDNETEFNYESETGLTTFYIPVPVEDMYIWPIEIHV 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01864 750 SUPERFAMILY (Trans)glycosidases 195 523 IPR017853 -
Tsu01g01864 750 Pfam Raffinose synthase or seed imbibition protein Sip1 7 733 IPR008811 -
Tsu01g01864 750 Gene3D Aldolase class I 197 517 IPR013785 -
Tsu01g01864 750 PANTHER - 1 750 IPR008811 -
Tsu01g01864 750 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01864 Tsu-Chr1 18710433 18715486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01864 1 552 Glycoside Hydrolase AT3G57520 77.738 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01864 K06617 - gmx:100807861 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01864 01 18710433 18715486 Tsu01g01864 01 18710433 18715486 ECH
Tsu07g03370 07 40121641 40127562 Tsu01g01864 01 18710433 18715486 PCT